Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0219
(645 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p pro... 33 0.33
AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-P... 33 0.33
AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-P... 33 0.33
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ... 32 0.58
U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensit... 29 5.4
BT016032-1|AAV36917.1| 798|Drosophila melanogaster RE04643p pro... 29 5.4
AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p pro... 29 5.4
AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p pro... 29 5.4
AE014296-2988|AAF49283.1| 798|Drosophila melanogaster CG5290-PA... 29 5.4
AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA... 29 5.4
AY069204-1|AAL39349.1| 729|Drosophila melanogaster GH26019p pro... 28 9.4
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 28 9.4
AE013599-3493|AAF46920.2| 729|Drosophila melanogaster CG3682-PA... 28 9.4
AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC... 28 9.4
>AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p
protein.
Length = 937
Score = 33.1 bits (72), Expect = 0.33
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = -1
Query: 468 RPCFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 289
R FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P
Sbjct: 178 RDLFALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRP 234
Query: 288 AGVLNGDERFRPSPL 244
G NG F SP+
Sbjct: 235 VGEENGIVVFSYSPI 249
>AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-PB,
isoform B protein.
Length = 937
Score = 33.1 bits (72), Expect = 0.33
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = -1
Query: 468 RPCFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 289
R FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P
Sbjct: 178 RDLFALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRP 234
Query: 288 AGVLNGDERFRPSPL 244
G NG F SP+
Sbjct: 235 VGEENGIVVFSYSPI 249
>AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-PA,
isoform A protein.
Length = 1201
Score = 33.1 bits (72), Expect = 0.33
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = -1
Query: 468 RPCFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 289
R FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P
Sbjct: 178 RDLFALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRP 234
Query: 288 AGVLNGDERFRPSPL 244
G NG F SP+
Sbjct: 235 VGEENGIVVFSYSPI 249
>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
protein.
Length = 1571
Score = 32.3 bits (70), Expect = 0.58
Identities = 50/193 (25%), Positives = 76/193 (39%), Gaps = 4/193 (2%)
Frame = -1
Query: 621 RLANLFAMIGRADIEGS----KSNVAMNAWLPQASYPCGNFSAPLAKNSLY*RIDRPCFA 454
R + LF RA + GS S++ N + +A G+ A L+ I P
Sbjct: 480 RCSKLFCHGSRAILLGSAIINSSHLGTN-FKARALIDSGS-EATFITEPLFNLIRLPFQV 537
Query: 453 VPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLN 274
V + L+Q F VS ++L LG + + P S S + L P+ A L
Sbjct: 538 VQAQVSGLNQTVAAQFKNAAVSP-SDLRLGRVAVGDDGLCPPSTSRKSAFL-PNSAKFLR 595
Query: 273 GDERFRPSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCYTSH 94
F PL AP D++ R+P P + + + + +ETI T
Sbjct: 596 DLPDF---PLADPKFYESAPIDVLIRSPHPASVLLSGAKTNICGSLLGQETIFRWVLTGP 652
Query: 93 VSLQCQTRVKLNR 55
VS Q+R+ L R
Sbjct: 653 VSASAQSRIPLFR 665
>U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensitive
serotonin transporterprotein.
Length = 622
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 225 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 121
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>BT016032-1|AAV36917.1| 798|Drosophila melanogaster RE04643p
protein.
Length = 798
Score = 29.1 bits (62), Expect = 5.4
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = -1
Query: 435 HLDQASFCPFAPREVS--VLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHA--GVLNGD 268
HL QA F F RE+ +L ELA G+L++ +++ Q L+ + G+L
Sbjct: 179 HL-QAHFNQFESRELQSLLLLELANGYLQFHRSEIASQILDELCKHLQVELKVEGLLGVR 237
Query: 267 ERFRPSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKV 151
+F+ L L K + ++ PLPP +NET K+
Sbjct: 238 TKFQQKALPQLCLKVE---HLNEQQPLPPAVQTNETTKL 273
>AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p
protein.
Length = 622
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 225 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 121
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p
protein.
Length = 249
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 132 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 10
S+ TI CY ++S QCQ R+ +VFF S A C
Sbjct: 14 SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57
>AE014296-2988|AAF49283.1| 798|Drosophila melanogaster CG5290-PA
protein.
Length = 798
Score = 29.1 bits (62), Expect = 5.4
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = -1
Query: 435 HLDQASFCPFAPREVS--VLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHA--GVLNGD 268
HL QA F F RE+ +L ELA G+L++ +++ Q L+ + G+L
Sbjct: 179 HL-QAHFNQFESRELQSLLLLELANGYLQFHRSEIASQILDELCKHLQVELKVEGLLGVR 237
Query: 267 ERFRPSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKV 151
+F+ L L K + ++ PLPP +NET K+
Sbjct: 238 TKFQQKALPQLCLKVE---HLNEQQPLPPAVQTNETTKL 273
>AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA
protein.
Length = 622
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 225 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 121
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY069204-1|AAL39349.1| 729|Drosophila melanogaster GH26019p
protein.
Length = 729
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 330 QSNSPPGSVLEPDHAGVLNGDERFRPS--PLCTLGTKHRAPADIIDRAPLPPN 178
Q PP + EP AG G ER + P T G RAP + R P N
Sbjct: 519 QPAKPPTT--EPTPAGAAGGAERGATALGPATTSGASERAPPPVKQRTPAASN 569
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -2
Query: 119 SPTYATPLMSPYNARLESSSTGSSFPADSPKP 24
+P++ + S Y A +S+S+G +PA +P+P
Sbjct: 153 APSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184
>AE013599-3493|AAF46920.2| 729|Drosophila melanogaster CG3682-PA,
isoform A protein.
Length = 729
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 330 QSNSPPGSVLEPDHAGVLNGDERFRPS--PLCTLGTKHRAPADIIDRAPLPPN 178
Q PP + EP AG G ER + P T G RAP + R P N
Sbjct: 519 QPAKPPTT--EPTPAGAAGGAERGATALGPATTSGASERAPPPVKQRTPAASN 569
>AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC,
isoform C protein.
Length = 945
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 330 QSNSPPGSVLEPDHAGVLNGDERFRPS--PLCTLGTKHRAPADIIDRAPLPPN 178
Q PP + EP AG G ER + P T G RAP + R P N
Sbjct: 519 QPAKPPTT--EPTPAGAAGGAERGATALGPATTSGASERAPPPVKQRTPAASN 569
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,327,726
Number of Sequences: 53049
Number of extensions: 715313
Number of successful extensions: 2225
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2225
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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