Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0217
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   9.8  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   9.8  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   9.8  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   9.8  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   9.8  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   9.8  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 558 IVCLPWDVPSRE 593
           +VC+ W+ P+RE
Sbjct: 127 VVCITWEPPTRE 138


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -2

Query: 184 IATGFH-GIHVIIGTLFLLICY 122
           IA GF     +IIG L +L CY
Sbjct: 156 IAAGFTIAASIIIGGLLMLFCY 177


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -2

Query: 184 IATGFH-GIHVIIGTLFLLICY 122
           IA GF     +IIG L +L CY
Sbjct: 156 IAAGFTIAASIIIGGLLMLFCY 177


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -2

Query: 184 IATGFH-GIHVIIGTLFLLICY 122
           IA GF     +IIG L +L CY
Sbjct: 156 IAAGFTIAASIIIGGLLMLFCY 177


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -2

Query: 184 IATGFH-GIHVIIGTLFLLICY 122
           IA GF     +IIG L +L CY
Sbjct: 156 IAAGFTIAASIIIGGLLMLFCY 177


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -2

Query: 184 IATGFH-GIHVIIGTLFLLICY 122
           IA GF     +IIG L +L CY
Sbjct: 732 IAAGFTIAASIIIGGLLMLFCY 753


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,152
Number of Sequences: 2352
Number of extensions: 8475
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)