Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0216
         (285 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.090
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   1.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   2.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   2.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.090
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = -2

Query: 206 LIFSITFRFLIYIYKFFVDFSYLLLDIFKT*IHCFGFSFFQTLSPRHLENISL*SFFLVF 27
           +IF++   FL+ IY FF  F    + +    + C  F FF  +    L  +   +  L+F
Sbjct: 154 IIFTVHLLFLLCIYHFFCAFIIFTMHL----LFCCAFIFF-NMHLLFLLCLDYFTLHLLF 208

Query: 26  SHCILF 9
             CI +
Sbjct: 209 LPCIYY 214



 Score = 23.4 bits (48), Expect = 0.48
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 206 LIFSITFRFLIYIYKFFVDFSYLL 135
           +IF++   FL+ IY F V   +LL
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLL 144



 Score = 20.2 bits (40), Expect = 4.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 206 LIFSITFRFLIYIYKFFVDFSYLL 135
           +IF++   FL+ IY F+     LL
Sbjct: 273 IIFTMHLLFLLCIYYFYCALIILL 296


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 218 FKICLIFSITFRFLIY 171
           F++CL+F++T  F  +
Sbjct: 417 FRVCLVFTLTGPFFTF 432


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 212 ICLIFSITFRFLIYIYKFFVDFSYLLLDIFKT*IHCFGFSFF 87
           +CL F   F +L YIY     +S  L  IFK      G++ F
Sbjct: 80  LCLPFYSYFFYLSYIY---TTYSRKLSGIFKYIDQMAGYTGF 118


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 212 ICLIFSITFRFLIYIYKFFVDFSYLLLDIFKT*IHCFGFSFF 87
           +CL F   F +L YIY     +S  L  IFK      G++ F
Sbjct: 36  LCLPFYSYFFYLSYIY---TTYSRKLSGIFKYIDQMAGYTGF 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,636
Number of Sequences: 336
Number of extensions: 558
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)