Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0215
         (752 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9YVT5 Cluster: Putative uncharacterized protein MSV157...    33   5.7  
UniRef50_Q5CQB7 Cluster: Bromo domain containing protein; n=2; C...    33   7.6  
UniRef50_Q4X358 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_Q5UQ71 Cluster: Uncharacterized protein L511; n=1; Acan...    33   10.0 

>UniRef50_Q9YVT5 Cluster: Putative uncharacterized protein MSV157;
           n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
           uncharacterized protein MSV157 - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 430

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -3

Query: 507 SRHPVLQNIIIDYYNVIKPKYYTYYNIKIEFRLKKN*SKKD*VPET-LTNKNKLNFLYLK 331
           S H  L +I I YY++ K +++ ++N    F++     KK+ +    LT KNK  FLY+K
Sbjct: 190 SMHDEL-DIKIIYYDINKQRHFNHFN---NFKVLPEYDKKNDIANVILTYKNKKLFLYIK 245

Query: 330 YDHNVK 313
             +N K
Sbjct: 246 KLYNSK 251


>UniRef50_Q5CQB7 Cluster: Bromo domain containing protein; n=2;
           Cryptosporidium|Rep: Bromo domain containing protein -
           Cryptosporidium parvum Iowa II
          Length = 809

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -3

Query: 573 TNTRSKNEYCFSLTF*AQLRFTSRHPVLQNIIIDYYNVIKPKYYTYYNIKI 421
           T     NEY F L   +     S H +++N+  + +N+IK      YNI I
Sbjct: 662 TKNLDNNEYIFPLKIYSSNMIKSNHNIMKNLSHNIHNIIKKSINNNYNIYI 712


>UniRef50_Q4X358 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 78

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 172 LLIVHLIKILYLNNYYH-IQIIFKAMLHHSVNYYVFF 65
           LLI+ ++ ILY  N YH I IIF  ++    N+Y+FF
Sbjct: 30  LLIILIMHILYDKNLYHTIVIIFIFIIFFLYNFYLFF 66


>UniRef50_Q5UQ71 Cluster: Uncharacterized protein L511; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein L511 - Mimivirus
          Length = 788

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = -3

Query: 513 FTSRHPVLQNIIIDYYNVIKPKYYTYYNIKIEFRLKKN*SKKD*VPETLTNKNKLNFL 340
           F S   ++ N+I    N ++  +Y YYNI   + LKKN    +   E   NKNK+ +L
Sbjct: 726 FRSYIKIVSNLIDKQINCLQRNFYYYYNIGELYDLKKNNIYSEYYDEWF-NKNKVVYL 782


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,682,830
Number of Sequences: 1657284
Number of extensions: 11239681
Number of successful extensions: 22811
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22799
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)