Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0215
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    28   0.070
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.49 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   6.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.0  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 656 IANRLKGSLRSRGAVFISTLCLDYLLKRQIHAQKMSIVSRL 534
           +AN+  G L     V I T+ + Y  KR+I  Q  S +SRL
Sbjct: 12  VANKFSGKLWPISIVLIYTVGVVYSFKRRIFYQDESPISRL 52


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 110 YYLYMIIVIKIQYFN*MYY**SLDFLYHLTSIFCCINFKTELSTVF*LDL-YFDCAFIM 283
           YY +++  + +     +YY       Y++  +FCC      +  +F L + YF CA I+
Sbjct: 242 YYAFILFTVHLLLLVCIYY------FYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALII 294



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 205 YTS*MIQKIQRLLIVHLIKILYLNNYYHIQIIFKAMLHHSVNYYVFFTVY 56
           Y++ +I  I  L    LI +L +  +Y+  I+F   L   V  Y F+ ++
Sbjct: 216 YSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMH 265


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 381 LSPFWINFFLNEILFLC 431
           L  FW  FF+  +L++C
Sbjct: 271 LLTFWSAFFIVNVLYIC 287


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = +1

Query: 244 LLTGPVFRLCIYNEILLVKF*HTFYIVIVL*VQKIKLIFVC 366
           L+T  +F +C+  +   + + H  YI +V  +    + ++C
Sbjct: 610 LITQTIFIICVIVQSEQIAWLHLLYIFLVGIMYAADVFYIC 650


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/43 (20%), Positives = 21/43 (48%)
 Frame = -2

Query: 343 FVLKVRSQCKMCVRILLKEFHYKCTIEIQVQLKDCAKFCFEIY 215
           FV+ +     +   +L +  +    I + + +K+C  +CF +Y
Sbjct: 250 FVVLIGDAYAVLNSVLFQNVYKPLPIVLSI-VKNCLSYCFNLY 291


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/43 (20%), Positives = 21/43 (48%)
 Frame = -2

Query: 343 FVLKVRSQCKMCVRILLKEFHYKCTIEIQVQLKDCAKFCFEIY 215
           FV+ +     +   +L +  +    I + + +K+C  +CF +Y
Sbjct: 250 FVVLIGDAYAVLNSVLFQNVYKPLPIVLSI-VKNCLSYCFNLY 291


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 191 HLTSIFCCINFKTELSTVF 247
           HL++I  C+N+   +ST F
Sbjct: 322 HLSNIEDCLNYVPHISTGF 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,413
Number of Sequences: 336
Number of extensions: 3514
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)