Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0215
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    25   2.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.8  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   5.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.8  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 298 LLKEFHYKCTIEIQVQLKDCAKFC 227
           LL    Y C   I +QLKD  K C
Sbjct: 16  LLNPTSYSCACPIGIQLKDNGKTC 39


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 585  PAKTTNTRSKNEYCFSLTF*AQLRFTSRH 499
            P  +T  R + EYC  L   A  R+  RH
Sbjct: 1981 PVSSTLWRQREEYCARLIQHAWKRYKQRH 2009


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 657 YCKSAERVSTLSRSGFHFYPLF 592
           YC    R    +RS +++YP++
Sbjct: 682 YCDFLNRAQVNNRSAYNYYPVY 703


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 657 YCKSAERVSTLSRSGFHFYPLF 592
           YC    R    +RS +++YP++
Sbjct: 682 YCDFLNRAQVNNRSAYNYYPVY 703


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,264
Number of Sequences: 2352
Number of extensions: 12588
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)