Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0212
(434 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa... 54 1e-06
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0... 54 1e-06
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN... 44 0.002
UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 42 0.004
UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve... 38 0.070
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu... 38 0.12
UniRef50_Q4T8E7 Cluster: Chromosome undetermined SCAF7818, whole... 36 0.37
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo... 36 0.49
UniRef50_UPI0001561623 Cluster: PREDICTED: similar to thyroid ho... 34 1.5
UniRef50_A4CNF8 Cluster: Primosomal protein N'; n=2; Flavobacter... 33 2.0
UniRef50_Q7QSD5 Cluster: GLP_426_32236_31316; n=1; Giardia lambl... 32 4.6
UniRef50_Q38BP0 Cluster: Putative uncharacterized protein; n=3; ... 32 6.0
UniRef50_A7S3P1 Cluster: Predicted protein; n=2; Nematostella ve... 31 8.0
>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
Aa1-330 - Rattus norvegicus (Rat)
Length = 151
Score = 54.4 bits (125), Expect = 1e-06
Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -1
Query: 227 RLFTLETCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSR-SEPYLPXIGFHGTX 51
RLFTLETCCGYGY PAR L HP P + + + R + + + P L F G
Sbjct: 25 RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNRDAFQGTGPSLGANPFQGAL 82
Query: 50 TLRQKRKLFPDLSAAS 3
+KR+L P L AS
Sbjct: 83 PFTKKRELSPGLPPAS 98
>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
LRRG00134 - Rattus norvegicus (Rat)
Length = 221
Score = 54.4 bits (125), Expect = 1e-06
Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -1
Query: 227 RLFTLETCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSR-SEPYLPXIGFHGTX 51
RLFTLETCCGYGY PAR L HP P + + + R + + + P L F G
Sbjct: 95 RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNRDAFQGTGPSLGANPFQGAL 152
Query: 50 TLRQKRKLFPDLSAAS 3
+KR+L P L AS
Sbjct: 153 PFTKKRELSPGLPPAS 168
>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence; n=3;
Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 136
Score = 43.6 bits (98), Expect = 0.002
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 4 DAAERSGKSFLFCLSVXVPWNPXXGRYGSEREEHRICGGVRILSA-DLENSGEGCTWRCR 180
+A G+S LF + PWN R G + + S L+ G GC + R
Sbjct: 57 EAGGSPGESSLFFVKGRAPWNGFAPREGPVPWKASRFRRRPVSSRWPLKIRGRGC--KSR 114
Query: 181 AGSYPYPQQVSKVKSL 228
AG YPYPQQVSKV SL
Sbjct: 115 AGPYPYPQQVSKVNSL 130
>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 144
Score = 42.3 bits (95), Expect = 0.004
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -3
Query: 252 LPTLFYRLEALHLGDLLRIWVRTG-ATSPRTSLT*IFKVRREYPDTAANAVLFAFRTISP 76
L TLFY+LEA+HLGDLLR+ VR G T P + + PD A + +T SP
Sbjct: 82 LSTLFYQLEAVHLGDLLRLSVRPGMKTIPSCGFS---RAVAGAPDPAQGLGSSSHKTPSP 138
Query: 75 XXRIP 61
IP
Sbjct: 139 DKPIP 143
Score = 41.5 bits (93), Expect = 0.007
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -1
Query: 323 QTRHAPVLRANPYSEVTDPICRLP 252
Q H P+LRANPY EVTD CRLP
Sbjct: 58 QGPHCPILRANPYPEVTDLFCRLP 81
>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 123
Score = 38.3 bits (85), Expect = 0.070
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3
Query: 252 LPTLFYRLEALHLGDLLRIWVR 187
LPTLFY+ EA HLGDLLR+ VR
Sbjct: 82 LPTLFYQPEAAHLGDLLRLLVR 103
Score = 37.1 bits (82), Expect = 0.16
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = -1
Query: 308 PVLRANPYSEVTDPICRLPYLHYSID*RLFTLETCCGYGYEPARHLHVHPSPEFSRSAES 129
P LRANP+ EVTD CRLP L P ++V PEFSR+ ES
Sbjct: 63 PTLRANPFPEVTDLFCRLPLPTLFYQPEAAHLGDLLRLLVRPDTKINVF--PEFSRAVES 120
>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
Euteleostomi|Rep: RRNA promoter binding protein - Rattus
norvegicus (Rat)
Length = 295
Score = 37.5 bits (83), Expect = 0.12
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -3
Query: 228 EALHLGDLLRIWVRTGA--TSPRTSLT*IFKVRREYPDTAANAVLFAFRTISPXXRIPWN 55
EA+HLGDLLRIWVR GA T + R P+ +S IP
Sbjct: 181 EAVHLGDLLRIWVRPGARFTPSPPDFQGPARAHRTPPEPRR---FPRHGPLSRGEPIPGR 237
Query: 54 XNAQAEKKTLPGPLSG 7
EK+TLPG +G
Sbjct: 238 PALHKEKRTLPGAPAG 253
Score = 35.5 bits (78), Expect = 0.49
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2
Query: 337 IRFPSKPDTPRSSEPILIPKLRIQFADF 254
+R P++P P EPILIPKLRI+ ADF
Sbjct: 146 LRAPARPTQPL--EPILIPKLRIRLADF 171
>UniRef50_Q4T8E7 Cluster: Chromosome undetermined SCAF7818, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7818,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 563
Score = 35.9 bits (79), Expect = 0.37
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = -2
Query: 229 RGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSGHRRKCGALRVP 89
RG + RP + R ST H NF P SGH+ CGAL+VP
Sbjct: 253 RGGAGPRPGGGLAAFSRSSSTSSDHGNFAMP---SGHQATCGALKVP 296
>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
tabacum (Common tobacco)
Length = 530
Score = 35.5 bits (78), Expect = 0.49
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2
Query: 253 LTYIILSTRGSSPWRPAADMGTN 185
L YI+ STRG SPWRP A +G N
Sbjct: 241 LAYIVPSTRGCSPWRPDAFVGGN 263
Score = 32.3 bits (70), Expect = 4.6
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3
Query: 303 PQSQSLFRSYGSNLPTSL 250
PQSQS RSYGS LPTSL
Sbjct: 224 PQSQSFSRSYGSILPTSL 241
>UniRef50_UPI0001561623 Cluster: PREDICTED: similar to thyroid hormone
receptor interactor 11; n=4; Equus caballus|Rep:
PREDICTED: similar to thyroid hormone receptor interactor
11 - Equus caballus
Length = 2268
Score = 33.9 bits (74), Expect = 1.5
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 346 TGRIRFPSKPDTPRSSEPILIPKLRIQFAD-FLTYIILSTRGSSPWR 209
TGR+ S PDTP P P+L+ F++ F+ ++ ++G+SP R
Sbjct: 2127 TGRLGSRSAPDTPPPRRPNQQPELKSSFSELFVNFLEAESQGASPPR 2173
>UniRef50_A4CNF8 Cluster: Primosomal protein N'; n=2;
Flavobacteriaceae|Rep: Primosomal protein N' -
Robiginitalea biformata HTCC2501
Length = 839
Score = 33.5 bits (73), Expect = 2.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -1
Query: 317 RHAPVLRANPYSEVTDPICRLPYLHYSID*RLFTLETCCGYGYEPARHLHVHPSPEFSRS 138
+H PVL ++ D LP LH I L L+ GY+P R + P++
Sbjct: 160 QHQPVLSVGEIGDIVDRKSVLPILHRMIGRDLLVLQEKLQQGYKPLRARFIRLHPDYEDQ 219
Query: 137 A 135
A
Sbjct: 220 A 220
>UniRef50_Q7QSD5 Cluster: GLP_426_32236_31316; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_32236_31316 - Giardia lamblia
ATCC 50803
Length = 306
Score = 32.3 bits (70), Expect = 4.6
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -2
Query: 376 HNARTSTRPGTGRIRFPSKPDTPRSSE-PILIPKLRIQFADFLTYIILSTRGSSPWRPAA 200
H+ R ST P + ++ S P + P I Q+A+ + T SSP RP+
Sbjct: 58 HSYRHSTPPSSRQVLNISAPTASTKPDLPYFIDPCIDQYAN-----LDLTEPSSP-RPSR 111
Query: 199 DMGTNRRDI--STYIPHLNFQGPQRVS 125
T+ I +TYIPH F+GP +++
Sbjct: 112 TPTTSEEPIRYNTYIPHPRFRGPNKLT 138
>UniRef50_Q38BP0 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 559
Score = 31.9 bits (69), Expect = 6.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 191 YEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYL 78
++P HLH H PE + E ++ P CS S P L
Sbjct: 34 FQPRSHLHPHGIPELRDAVELLQPPEGKPCSRWSAPRL 71
>UniRef50_A7S3P1 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1541
Score = 31.5 bits (68), Expect = 8.0
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = -3
Query: 297 SQSLFRSYGSNLPTSLPTLFYRLEALHLGDLLRIWVRTGATSPRTSLT*IFKVRREYPDT 118
+Q R +G+N P S T LE + D++R +VR S T R+EY D
Sbjct: 193 AQGSQRRFGANTPYSTRTYSSFLEDDDMSDIVREYVRYSRLHAEPSTTTHDDQRKEYDDD 252
Query: 117 AANA 106
A +A
Sbjct: 253 AQDA 256
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,241,612
Number of Sequences: 1657284
Number of extensions: 9084837
Number of successful extensions: 28360
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28345
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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