Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0212
         (434 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   2.0  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   2.0  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   2.0  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   4.7  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   6.2  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.2  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   6.2  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    22   8.2  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 292 LALRTGACRVWTGSGCGRCRVWSM 363
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 356 QTRHRPHPLPVQTRHAPVLRANPYSEVT 273
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 356 QTRHRPHPLPVQTRHAPVLRANPYSEVT 273
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 161 PSPEFSRSAESIRTPPQMRCSSRSEPY 81
           P P  + + E    PP++ C+   E Y
Sbjct: 39  PEPSTTEATEEESPPPKIECTDPREVY 65


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
 Frame = -2

Query: 373 NARTSTRPGTGR--IRFPSKPDTPRSSEPILIPKLRIQFADFLTYIILSTRGSS--PW-- 212
           N  TSTRPG     +   S+       +  ++P+     AD    + + T   S  P   
Sbjct: 410 NRPTSTRPGNNLNDVLIFSRFQNETMEQTTVVPEA----ADTTEPLTIETTSQSFVPLTN 465

Query: 211 RPAADMGTNRRDISTYIP 158
           RP+  +G  +RD+S  +P
Sbjct: 466 RPSGRVGRTKRDVSYKVP 483


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 330 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 428
           K +RPV    DV  +C   ++S LI   LKN I
Sbjct: 41  KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 73


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 330 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 428
           K +RPV    DV  +C   ++S LI   LKN I
Sbjct: 41  KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 73


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +3

Query: 270 IRNFGIRIGSEDRGVSGLDGKRMRPVPG 353
           I N  I      R VSGLD  R  P PG
Sbjct: 10  IGNLFIEPNRYRRIVSGLDSTRGSPAPG 37


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 418 LRPHYIKILTR*NEHNARTSTRPGTGRIR 332
           +R  +  + T    HN  +  RP TGR R
Sbjct: 110 VRSGFTLLQTASTPHNRNSDPRPATGRKR 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,510
Number of Sequences: 2352
Number of extensions: 8583
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)