Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0205
         (772 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CR41 Cluster: Putative uncharacterized protein; n=2; ...    34   3.4  
UniRef50_Q46216 Cluster: VirS; n=4; Clostridium perfringens|Rep:...    33   5.9  

>UniRef50_Q5CR41 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 910

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 21/67 (31%), Positives = 36/67 (53%)
 Frame = +3

Query: 6   IRLKLIKALLKTSKSRIRFSFCCYVIFKGLRT*TYVYLNCLRSRNHDNVLQQWKRILILA 185
           +++KLI+  L ++K R       Y+   G    ++ Y++ ++  N  N     KRI  LA
Sbjct: 50  LKIKLIQNSLSSNKLREYMIRAIYIEMLGHDA-SFAYIHAIKMTNDKNAFV--KRIGYLA 106

Query: 186 CSLFVNK 206
           CS+F+NK
Sbjct: 107 CSIFLNK 113


>UniRef50_Q46216 Cluster: VirS; n=4; Clostridium perfringens|Rep:
           VirS - Clostridium perfringens
          Length = 440

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +1

Query: 553 MKCIQILAVYFIFIFDVNALSIAPIIEVTSAMN 651
           +KCI I  ++++F+  V ALSI+ I+++ S +N
Sbjct: 85  IKCIMISLIFWLFMLTVEALSISFIVKINSLVN 117


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,879,720
Number of Sequences: 1657284
Number of extensions: 13177330
Number of successful extensions: 23961
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23957
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)