Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0204
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   3.6  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    25   3.6  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    24   4.7  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   6.3  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    23   8.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.3  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.3  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 440 ISGRSFRAIVAEKPLL-SLFHYLLVGRKRC 526
           I G  F  ++  +P + S  +YLL+G  RC
Sbjct: 98  ILGNIFSMVILSRPQMRSSINYLLIGLARC 127


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 674 LSKNNAGVLRPAQRGQKPRVEQKGKSWLDPMFSTHRDCES 793
           L  N+   L    +  + RV   G      +++THRDC S
Sbjct: 217 LEVNDLRYLSKETKACRDRVRMSGCDVCSEVYNTHRDCLS 256


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 674 LSKNNAGVLRPAQRGQKPRVEQKGKSWLDPMFSTHRDC 787
           L  N+   L    +  + RV   G      +++THRDC
Sbjct: 217 LEVNDLRYLSKETKACRDRVRMSGCDVCSEVYNTHRDC 254


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -1

Query: 650  PPGSVLEP-DHAGVLNGD 600
            PPGS+L+P D A V+ G+
Sbjct: 1092 PPGSILDPSDGAAVVGGN 1109


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = +1

Query: 625 SGSRTLP----GGEFDWGGTSVKE 684
           +G+RT+P    GG F  GGT +K+
Sbjct: 21  TGARTVPRVFIGGNFVGGGTDIKK 44


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 671 VPPQSNSPPGSVLEPD 624
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 79  PLNGGRTESCRSRTKRNR 26
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,333
Number of Sequences: 2352
Number of extensions: 19953
Number of successful extensions: 40
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)