Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0204
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015311-1|AAT94539.1| 1320|Drosophila melanogaster AT04056p pro...    31   2.4  
AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p pro...    29   7.4  

>BT015311-1|AAT94539.1| 1320|Drosophila melanogaster AT04056p
           protein.
          Length = 1320

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -1

Query: 260 WLLKRVIVTPAVYPRLLEFLHVDIQSTGQKSHCVNTREGHRNALF*LDSRIPLV 99
           W+LK + V P+V     +    D+Q T ++ HC    +  +NAL   ++R+ LV
Sbjct: 88  WMLKHLHVLPSVVVLFQDMEWNDLQWTEKQVHCAAIVQALKNALQERNTRLCLV 141


>AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -1

Query: 464 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 342
           S+ TI   CY  ++S    QCQ R+   +VFF    S A    C
Sbjct: 14  SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,817,433
Number of Sequences: 53049
Number of extensions: 847431
Number of successful extensions: 2695
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2695
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)