Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0200
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   4.1  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    24   5.4  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   5.4  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   5.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   5.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   5.4  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   7.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.5  
AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative odorant-b...    23   9.5  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
          gambiae putativetubulin alpha chain mRNA, complete cds.
          ).
          Length = 91

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 19 LALRTGACRVWTGSGCGRCRVWSM 90
          +++  G   V  G+ C  C VWSM
Sbjct: 5  ISVHVGQAGVQIGNPCWDCTVWSM 28


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/76 (21%), Positives = 32/76 (42%)
 Frame = -2

Query: 419 IQSTGQKSHCVNTREGHRNALF*LDSRIPLVRASSELTVERRSYRIVPIAHETKPHDLTA 240
           +Q     +  + + +  R  +  LD +   +RA ++L + RR      I  E KP  ++ 
Sbjct: 342 VQDCADSATALGSEDQVRQEISVLDGKEAKIRADNDLLMGRRQELNQKIDTELKPEMMSI 401

Query: 239 RKIRGRPENAGPDPVR 192
            +     EN   + +R
Sbjct: 402 ERSIETIENVASNKLR 417


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -2

Query: 350 LDSRIPLVRASSELTVERRSYRIVPIAHETKPHDLTARKIRGRP 219
           + + + L     E  V+     I+P A  +KP D T + I  +P
Sbjct: 17  IGASVGLPTVDEENVVQAEQLPILPTADSSKPTDDTVKAIAPQP 60


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 83  QTRHRPHPLPVQTRHAPVLRANPYSEV 3
           Q  H PH    Q +H P   + P++ V
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANV 98


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 83  QTRHRPHPLPVQTRHAPVLRANPYSEV 3
           Q  H PH    Q +H P   + P++ V
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANV 99


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 500 DEAFGYLKRVIVTPAVYPRLLEFLHV-DIQSTGQKSHC 390
           D +F  L RV  TPA  P  +EFL + D      + HC
Sbjct: 635 DASFNRLTRV--TPATIPNSIEFLFLNDNHIVHVEPHC 670


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 307 PLNGGRTESCRSRTKRNRT 251
           P +GGR  SCRS   R R+
Sbjct: 262 PRSGGRWPSCRSPPARRRS 280


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 205 GPAFSGLPRIFLAVRSCGFVSCAIGTILYD 294
           G    G   +FL   SC +  C +G ++ D
Sbjct: 350 GTQVIGTTEVFLDRESCRWCECTLGDLIAD 379


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = -3

Query: 274  SRTKRNRTTLRLG--RSAEGR 218
            SRT R+R TLRL   RS+ GR
Sbjct: 991  SRTLRSRETLRLAQPRSSAGR 1011


>AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative
           odorant-binding protein OBPjj11 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 323 HGQGESDCLI-KTKHCDGPRGC*RNVISAQC 412
           +GQ ++D L+ + ++ DGP  C R+    QC
Sbjct: 95  YGQEKADELVARCRNNDGPDACERSFRLLQC 125


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,120
Number of Sequences: 2352
Number of extensions: 15414
Number of successful extensions: 35
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)