Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0200
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    31   1.6  
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    31   1.6  
AY095099-1|AAM11427.1|  984|Drosophila melanogaster SD09402p pro...    29   6.4  
AE014298-1795|AAF48187.3| 1470|Drosophila melanogaster CG17762-P...    29   6.4  
AE014296-288|AAF47514.1|  985|Drosophila melanogaster CG7879-PB,...    29   6.4  
AE014296-287|AAF47513.1|  985|Drosophila melanogaster CG7879-PA,...    29   6.4  

>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 307 PLNGGRTESCRSRTK-RNRTTLRLGRSAEGRRTRVRIQS 194
           PL GGR+ S RSR++ R+R+  R      GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 307 PLNGGRTESCRSRTK-RNRTTLRLGRSAEGRRTRVRIQS 194
           PL GGR+ S RSR++ R+R+  R      GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AY095099-1|AAM11427.1|  984|Drosophila melanogaster SD09402p
           protein.
          Length = 984

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 482 GSQMPRHLIVTRMNGLTRFPLSLSTI*RNHSQGNGLGEN 598
           G  MP H+   + NG+  FP +++     +   NG G N
Sbjct: 642 GGNMPFHMPPLQQNGVNNFPFNMNNNYNYNGNSNGNGPN 680


>AE014298-1795|AAF48187.3| 1470|Drosophila melanogaster CG17762-PC,
           isoform C protein.
          Length = 1470

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = -2

Query: 293 SYRIVPIAHETKPHDLTARKIRGRPENAGPDPVRNVRRFSRVS 165
           S   VP A ET  HD  A     RP  + PDPV N  R + +S
Sbjct: 689 SLEFVPEAGETSAHDGVATATSSRP--SSPDPVVNSARETLLS 729


>AE014296-288|AAF47514.1|  985|Drosophila melanogaster CG7879-PB,
           isoform B protein.
          Length = 985

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 482 GSQMPRHLIVTRMNGLTRFPLSLSTI*RNHSQGNGLGEN 598
           G  MP H+   + NG+  FP +++     +   NG G N
Sbjct: 643 GGNMPFHMPPLQQNGVNNFPFNMNNNYNYNGNSNGNGPN 681


>AE014296-287|AAF47513.1|  985|Drosophila melanogaster CG7879-PA,
           isoform A protein.
          Length = 985

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 482 GSQMPRHLIVTRMNGLTRFPLSLSTI*RNHSQGNGLGEN 598
           G  MP H+   + NG+  FP +++     +   NG G N
Sbjct: 643 GGNMPFHMPPLQQNGVNNFPFNMNNNYNYNGNSNGNGPN 681


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,386,991
Number of Sequences: 53049
Number of extensions: 685016
Number of successful extensions: 1898
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1898
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)