Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0199
(741 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28560.1 68417.m04085 leucine-rich repeat family protein (fra... 30 1.4
At1g50260.1 68414.m05635 C2 domain-containing protein low simila... 30 1.4
At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative... 30 1.9
At2g28990.1 68415.m03526 leucine-rich repeat protein kinase, put... 30 1.9
At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase fa... 30 1.9
At1g76965.1 68414.m08961 glycine-rich protein 29 2.4
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 4.3
At5g42370.1 68418.m05159 expressed protein 29 4.3
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 4.3
At5g16970.1 68418.m01988 NADP-dependent oxidoreductase, putative... 28 5.7
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 5.7
At5g22740.1 68418.m02656 glycosyl transferase family 2 protein s... 28 7.5
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 28 7.5
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 28 7.5
At5g22390.1 68418.m02612 expressed protein 27 9.9
At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative... 27 9.9
>At4g28560.1 68417.m04085 leucine-rich repeat family protein
(fragment) contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611;
Length = 450
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 141 KRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIETVPLPGSGIGNRIP 1
K+ +F DLS G+FG+P +F E + + V L G+ +G RIP
Sbjct: 274 KKLVFLDLSYNRFGNFGVP----LFLAEMSSLREVHLSGNKLGGRIP 316
>At1g50260.1 68414.m05635 C2 domain-containing protein low
similarity to CLB1 [Lycopersicon esculentum] GI:2789434;
contains Pfam profile PF00168: C2 domain
Length = 675
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 579 RTRVLRPSADLPSRKVVSVSFRARSARFCTTAVQRSAQN 695
R+RVLRPS + + + +S FR S T R A N
Sbjct: 37 RSRVLRPSVKISNFRFISCGFRGNSKNLRLTDSSRKAAN 75
>At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 239
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 586 RVRIQSET*DDFRECHIKYIQFLRPHI 506
R+RIQ DF + + K+++FL PHI
Sbjct: 172 RIRIQGFVVSDFYDEYSKFLEFLHPHI 198
>At2g28990.1 68415.m03526 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 884
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 562 TFRTGSGPAFSGLPRIFLAVRSCRFRFVRDRHDSVRPPFNGQLRT 696
T+ T SG R++L+ R+ D HD + PFNG T
Sbjct: 179 TYVTQSGSLMMSF-RVYLSNSDASIRYADDVHDRIWSPFNGSSHT 222
>At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 530
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 164 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLLKR-FRCRVPESETGF 3
MEL+RS ++ T +RRLQ L +P E S L + +L V ETGF
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVLTNDLSSSVRVGETGF 110
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 455 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 360
PG + FP KP+ P P +P+L + F D
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 242 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 108
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 181 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 71
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 44 SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 175
S++ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At5g16970.1 68418.m01988 NADP-dependent oxidoreductase, putative
(P1) identical to probable NADP-dependent oxidoreductase
P1, zeta-crystallin homolog [SP|Q39172][gi:886428],
Arabidopsis thaliana; similar to allyl alcohol
dehydrogenase [Nicotiana tabacum] GI:6692816; contains
Pfam profile PF00107: oxidoreductase, zinc-binding
dehydrogenase family
Length = 345
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 586 RVRIQSET*DDFRECHIKYIQFLRPHI 506
R+RIQ DF + + K+++F+ PHI
Sbjct: 278 RIRIQGFVVSDFYDKYSKFLEFVLPHI 304
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 237 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 139
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At5g22740.1 68418.m02656 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535
Length = 534
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 514 ASKTVYI*YDTRENRLTFRTGSGPAFSGLPRIFLAVRSCRFRFVRDRHDSVRPPF 678
ASK + I Y RENR+ ++ G+ GL R + V+ C + + D P F
Sbjct: 154 ASKGINIRYQIRENRVGYKAGA--LKEGLKRSY--VKHCEYVVIFDADFQPEPDF 204
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 464 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 345
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 464 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 345
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 116 ERSGKSFLFCLSVRVPWNPIEG 181
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 345
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 586 RVRIQSET*DDFRECHIKYIQFLRPHI 506
R+RIQ DF E + K++ F+ PHI
Sbjct: 278 RIRIQGFAVFDFYEKYSKFLDFVLPHI 304
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,292,357
Number of Sequences: 28952
Number of extensions: 385636
Number of successful extensions: 1127
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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