Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0196
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 211 FHEIYESG*SEYRRGFQLNLKNVV 282
           FH IYE+    Y+ G Q ++ N V
Sbjct: 141 FHLIYEAHGFSYKCGIQYHICNTV 164


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 211 FHEIYESG*SEYRRGFQLNLKNVV 282
           FH IYE+    Y+ G Q ++ N V
Sbjct: 137 FHLIYEAHGFSYKCGIQYHICNTV 160


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 478 KNWLKLHLLIPYCE 519
           + W+ LH+  P CE
Sbjct: 474 QTWITLHIWTPKCE 487


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 478 KNWLKLHLLIPYCE 519
           + W+ LH+  P CE
Sbjct: 474 QTWITLHIWTPKCE 487


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 478 KNWLKLHLLIPYCE 519
           + W+ LH+  P CE
Sbjct: 474 QTWITLHIWTPKCE 487


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 478 KNWLKLHLLIPYCE 519
           + W+ LH+  P CE
Sbjct: 474 QTWITLHIWTPKCE 487


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,755
Number of Sequences: 336
Number of extensions: 2261
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)