Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0193
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   6.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   6.0  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 656 LPQRAKFSQNVVMSDQSLPRSSCPR 730
           + + A FS  V+ SD+ L    CP+
Sbjct: 15  IEEPATFSDAVLSSDEELFHQKCPK 39


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 74  QCIKNFGDFFSG 39
           +C +NF DFF G
Sbjct: 109 ECAENFVDFFQG 120


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -2

Query: 736 ACSWAARPWQGLIGHNDVLAKLSPLREKIKQLADAGSSNQPEWFTKVLGL 587
           A + A +P    I H+D  AKL+ +R+   Q  +       E+ T V+ L
Sbjct: 131 AAAQAGQP-DNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNL 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,163
Number of Sequences: 336
Number of extensions: 4077
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)