Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0193
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF061268-1|AAC67389.1|  641|Drosophila melanogaster transferrin ...    62   1e-09
AE014298-2709|AAF48831.1|  641|Drosophila melanogaster CG6186-PA...    62   1e-09
BT004490-1|AAO42654.1|  819|Drosophila melanogaster LD22449p pro...    49   6e-06
AE014296-2160|AAF49900.1|  819|Drosophila melanogaster CG10620-P...    49   6e-06
AE013599-2223|AAF58039.1|  714|Drosophila melanogaster CG3666-PA...    36   0.059
AY060694-1|AAL28242.1|  384|Drosophila melanogaster GH13735p pro...    30   3.9  
BT021278-1|AAX33426.1|  934|Drosophila melanogaster RE42943p pro...    29   6.7  

>AF061268-1|AAC67389.1|  641|Drosophila melanogaster transferrin
           precursor protein.
          Length = 641

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
 Frame = -2

Query: 736 ACSWAARPWQGLIGHNDVL---AKLSPLREKIKQL-ADAGSSNQPEWFTKVLGLSDKILR 569
           ACSWA RPW G I +   +    +L  L+ ++++  A+   +   +    +L   + +  
Sbjct: 294 ACSWAQRPWSGYISNEQAVHNSEQLHQLQSRLERFFANGLQAQNKDAAAHLLIQPNAVYH 353

Query: 568 GRQYSDQSH*LFEQGQLHRSIERGHGAPELVVRLCVTSNVALAKCRAMSVFAFSRDIRPI 389
            +  +       E+      IER  G+    +RLC  ++   AKC+A+   A++RD RP 
Sbjct: 354 SKDAAIDPKVYLERAGYKDVIERD-GSAIRKIRLCAQNDDEFAKCQALHQAAYARDARPE 412

Query: 388 LDCVQEASETDCLKSVQDNGSDLASV 311
           L+CVQ    TDC+ ++    +DL  V
Sbjct: 413 LECVQ---STDCVVALTKKEADLTIV 435



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
 Frame = -1

Query: 218 VAVVKKGTSFNKMEDLRGKKSCHSSYGTFSGLDAPLYYLINKRIIK---------PDQCI 66
           + +VKK +    ++ LRG KSCH+ +G   G   P+  L N  ++K          ++ +
Sbjct: 122 IILVKKDSPIRTLQQLRGAKSCHTGFGRNVGYKIPITKLKNTHVLKVSADPQISATEREL 181

Query: 65  KNFGDFFSGGSCLPG 21
           K+  +FF+  SCL G
Sbjct: 182 KSLSEFFT-QSCLVG 195



 Score = 32.7 bits (71), Expect = 0.55
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = -2

Query: 490 APELVVRLCVTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLKSVQDNGSDLASV 311
           A E + RLCV   + LA+C+ +        IR  ++CV      DCL+ ++   +D+ + 
Sbjct: 29  AEEPIYRLCVPQ-IYLAECQQLLADPSEAGIR--MECVAGRDRVDCLELIEQRKADVLAT 85

Query: 310 --DDMRVA 293
             +DM +A
Sbjct: 86  EPEDMYIA 93


>AE014298-2709|AAF48831.1|  641|Drosophila melanogaster CG6186-PA
           protein.
          Length = 641

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
 Frame = -2

Query: 736 ACSWAARPWQGLIGHNDVL---AKLSPLREKIKQL-ADAGSSNQPEWFTKVLGLSDKILR 569
           ACSWA RPW G I +   +    +L  L+ ++++  A+   +   +    +L   + +  
Sbjct: 294 ACSWAQRPWSGYISNEQAVHNSEQLHQLQSRLERFFANGLQAQNKDAAAHLLIQPNAVYH 353

Query: 568 GRQYSDQSH*LFEQGQLHRSIERGHGAPELVVRLCVTSNVALAKCRAMSVFAFSRDIRPI 389
            +  +       E+      IER  G+    +RLC  ++   AKC+A+   A++RD RP 
Sbjct: 354 SKDAAIDPKVYLERAGYKDVIERD-GSAIRKIRLCAQNDDEFAKCQALHQAAYARDARPE 412

Query: 388 LDCVQEASETDCLKSVQDNGSDLASV 311
           L+CVQ    TDC+ ++    +DL  V
Sbjct: 413 LECVQ---STDCVVALTKKEADLTIV 435



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
 Frame = -1

Query: 218 VAVVKKGTSFNKMEDLRGKKSCHSSYGTFSGLDAPLYYLINKRIIK---------PDQCI 66
           + +VKK +    ++ LRG KSCH+ +G   G   P+  L N  ++K          ++ +
Sbjct: 122 IILVKKDSPIRTLQQLRGAKSCHTGFGRNVGYKIPITKLKNTHVLKVSADPQISATEREL 181

Query: 65  KNFGDFFSGGSCLPG 21
           K+  +FF+  SCL G
Sbjct: 182 KSLSEFFT-QSCLVG 195



 Score = 32.7 bits (71), Expect = 0.55
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = -2

Query: 490 APELVVRLCVTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLKSVQDNGSDLASV 311
           A E + RLCV   + LA+C+ +        IR  ++CV      DCL+ ++   +D+ + 
Sbjct: 29  AEEPIYRLCVPQ-IYLAECQQLLADPSEAGIR--MECVAGRDRVDCLELIEQRKADVLAT 85

Query: 310 --DDMRVA 293
             +DM +A
Sbjct: 86  EPEDMYIA 93


>BT004490-1|AAO42654.1|  819|Drosophila melanogaster LD22449p
           protein.
          Length = 819

 Score = 49.2 bits (112), Expect = 6e-06
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
 Frame = -1

Query: 272 LAPGLPEVYGEKKTPNYAVAVVKKGTSFNKMEDLRGKKSCHSSYGTFSGLDAPLYYLINK 93
           L P + EVY   +   Y VAV K+     ++  L+GK +CH+   T +G   P+   I+ 
Sbjct: 518 LVPFMSEVYNLGEPEYYVVAVAKEDDPDTELTYLKGKNTCHTGINTAAGWTYPMALFISN 577

Query: 92  RIIKPDQC--IKNFGDFFSGGSCLPG 21
             I+P  C  ++   ++F+  SC+PG
Sbjct: 578 GWIRPYGCDSVRAAAEYFT-KSCVPG 602



 Score = 35.1 bits (77), Expect = 0.10
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = -2

Query: 487 PELVVRLCVTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLKSVQDNGSDLASVD 308
           P   + LCVTS   L KC  M     +  ++P L C +  S  +C++ ++   +D++  D
Sbjct: 446 PVPAMTLCVTSENELDKCIKMRTALKAHLLKPELICKKMHSHINCMQFIEAGKADISVFD 505

Query: 307 DMRVAAAAKKYVLHP 263
              V      Y L P
Sbjct: 506 AGDVYTGGLNYDLVP 520


>AE014296-2160|AAF49900.1|  819|Drosophila melanogaster CG10620-PA
           protein.
          Length = 819

 Score = 49.2 bits (112), Expect = 6e-06
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
 Frame = -1

Query: 272 LAPGLPEVYGEKKTPNYAVAVVKKGTSFNKMEDLRGKKSCHSSYGTFSGLDAPLYYLINK 93
           L P + EVY   +   Y VAV K+     ++  L+GK +CH+   T +G   P+   I+ 
Sbjct: 518 LVPFMSEVYNLGEPEYYVVAVAKEDDPDTELTYLKGKNTCHTGINTAAGWTYPMALFISN 577

Query: 92  RIIKPDQC--IKNFGDFFSGGSCLPG 21
             I+P  C  ++   ++F+  SC+PG
Sbjct: 578 GWIRPYGCDSVRAAAEYFT-KSCVPG 602



 Score = 35.1 bits (77), Expect = 0.10
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = -2

Query: 487 PELVVRLCVTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLKSVQDNGSDLASVD 308
           P   + LCVTS   L KC  M     +  ++P L C +  S  +C++ ++   +D++  D
Sbjct: 446 PVPAMTLCVTSENELDKCIKMRTALKAHLLKPELICKKMHSHINCMQFIEAGKADISVFD 505

Query: 307 DMRVAAAAKKYVLHP 263
              V      Y L P
Sbjct: 506 AGDVYTGGLNYDLVP 520


>AE013599-2223|AAF58039.1|  714|Drosophila melanogaster CG3666-PA
           protein.
          Length = 714

 Score = 35.9 bits (79), Expect = 0.059
 Identities = 19/80 (23%), Positives = 34/80 (42%)
 Frame = -2

Query: 487 PELVVRLCVTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLKSVQDNGSDLASVD 308
           P   +  C TS +   KC  +   +    ++P + CV+   E  CL + +   +D+  VD
Sbjct: 366 PPRSIVFCTTSIIQHIKCSWLQEASQVYGVQPNIQCVRTMDEQQCLDNTKFKETDVVLVD 425

Query: 307 DMRVAAAAKKYVLHPVFQRY 248
                 A + Y L P+   +
Sbjct: 426 QEMRVKAQRDYNLVPLLYEF 445



 Score = 31.1 bits (67), Expect = 1.7
 Identities = 18/88 (20%), Positives = 37/88 (42%)
 Frame = -1

Query: 290 SSKEIRLAPGLPEVYGEKKTPNYAVAVVKKGTSFNKMEDLRGKKSCHSSYGTFSGLDAPL 111
           + ++  L P L E   +       +A+V K   F    DL+G ++C  S+      +   
Sbjct: 432 AQRDYNLVPLLYEFAADMHDRYVTIALVHKDAKFESFRDLKGARACLPSF------EGAA 485

Query: 110 YYLINKRIIKPDQCIKNFGDFFSGGSCL 27
           +  + + I+     +++   +F   SCL
Sbjct: 486 HLSVQETIVNATGKVQSLHSYFHRDSCL 513



 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 218 VAVVKKGTSFNKMEDLRGKKSCHSSYG 138
           VAVV    + + + DLRG + CH  YG
Sbjct: 117 VAVVDNHANIHTVHDLRGARLCHPGYG 143


>AY060694-1|AAL28242.1|  384|Drosophila melanogaster GH13735p
           protein.
          Length = 384

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 218 VAVVKKGTSFNKMEDLRGKKSCHSSYG 138
           VAVV    + + + DLRG + CH  YG
Sbjct: 117 VAVVDNHANIHTVHDLRGARLCHPGYG 143


>BT021278-1|AAX33426.1|  934|Drosophila melanogaster RE42943p
           protein.
          Length = 934

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -2

Query: 673 LSPL-REKIKQLADAGSSNQPEWFTKVLG 590
           LSP  +EK+K+L DAG  N P   +KV G
Sbjct: 840 LSPAAKEKVKRLTDAGFGNLPICMSKVSG 868


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,073,315
Number of Sequences: 53049
Number of extensions: 773365
Number of successful extensions: 1782
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1780
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)