Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0193
(746 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 106 3e-25
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 106 3e-25
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 106 3e-25
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 4.0
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 4.0
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 4.0
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 21 9.3
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 106 bits (254), Expect = 3e-25
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Frame = -2
Query: 739 KACSWAARPWQGLIGHNDVLAKLSPLREKIKQLADAGSSNQPEWFTKVLGLSDKILR--G 566
K C+WAARPWQG + +N V + +++++ L G + +W+ ++ L++K L
Sbjct: 299 KPCTWAARPWQGYMTNNGV-NNVEAVQKELTDLGKLGEEEKADWWKDIMLLNEKTLAVPA 357
Query: 565 RQYSDQSH*LFEQGQLHRSIERGHGAPELVVRLCVTSNVALAKCRAMSVFAFSRDIRPIL 386
++H + + IER GA + ++R C S L KC+A++ A+SRD+RP
Sbjct: 358 PPVLPENH--LKNAKYLDVIERNSGATDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPKY 415
Query: 385 DCVQEASETDCLKSVQDNGSDLASVDDMRVAAAAKKYVLHPV 260
DC E S+ DCLK++++N +DL V V A K+Y P+
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPI 457
Score = 75.4 bits (177), Expect = 5e-16
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Frame = -1
Query: 290 SSKEIRLAPGLPEVYGEKKTPNY----AVAVVKKGTSFNKMEDLRGKKSCHSSY-GTFSG 126
++KE P + E YG T N+ AVAVV K +S NK+EDLR KKSCHS Y +F+G
Sbjct: 448 ATKEYNTVPIIAESYGSGST-NFNERPAVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAG 506
Query: 125 LDAPLYYLINKRIIKPDQCIKNFGDFFSGGSCLPG 21
AP+Y L K +IK + DFFS GSC PG
Sbjct: 507 WTAPIYTLKRKGLIKSE---NEAADFFS-GSCAPG 537
Score = 35.9 bits (79), Expect = 4e-04
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 221 AVAVVKKGTSFNKMEDLRGKKSCHSSYGTFSGLDAPL 111
AVAV+ K N ++ LRG KSCH+ G G P+
Sbjct: 125 AVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPI 161
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -2
Query: 388 LDCVQEASETDCLKSVQDNGSDLASVD--DMRVAAAAKK 278
+ C+ +C++ V +D+ +VD DM +A K
Sbjct: 60 VSCISGRDRYECIEKVGKKEADVVAVDPEDMYLAVKDNK 98
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 106 bits (254), Expect = 3e-25
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Frame = -2
Query: 739 KACSWAARPWQGLIGHNDVLAKLSPLREKIKQLADAGSSNQPEWFTKVLGLSDKILR--G 566
K C+WAARPWQG + +N V + +++++ L G + +W+ ++ L++K L
Sbjct: 299 KPCTWAARPWQGYMTNNGV-NNVEAVQKELTDLGKLGEEEKADWWKDIMLLNEKTLAVPA 357
Query: 565 RQYSDQSH*LFEQGQLHRSIERGHGAPELVVRLCVTSNVALAKCRAMSVFAFSRDIRPIL 386
++H + + IER GA + ++R C S L KC+A++ A+SRD+RP
Sbjct: 358 PPVLPENH--LKNAKYLDVIERNSGATDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPKY 415
Query: 385 DCVQEASETDCLKSVQDNGSDLASVDDMRVAAAAKKYVLHPV 260
DC E S+ DCLK++++N +DL V V A K+Y P+
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPI 457
Score = 75.4 bits (177), Expect = 5e-16
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Frame = -1
Query: 290 SSKEIRLAPGLPEVYGEKKTPNY----AVAVVKKGTSFNKMEDLRGKKSCHSSY-GTFSG 126
++KE P + E YG T N+ AVAVV K +S NK+EDLR KKSCHS Y +F+G
Sbjct: 448 ATKEYNTVPIIAESYGSGST-NFNERPAVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAG 506
Query: 125 LDAPLYYLINKRIIKPDQCIKNFGDFFSGGSCLPG 21
AP+Y L K +IK + DFFS GSC PG
Sbjct: 507 WTAPIYTLKRKGLIKSE---NEAADFFS-GSCAPG 537
Score = 35.9 bits (79), Expect = 4e-04
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 221 AVAVVKKGTSFNKMEDLRGKKSCHSSYGTFSGLDAPL 111
AVAV+ K N ++ LRG KSCH+ G G P+
Sbjct: 125 AVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPI 161
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -2
Query: 388 LDCVQEASETDCLKSVQDNGSDLASVD--DMRVAAAAKK 278
+ C+ +C++ V +D+ +VD DM +A K
Sbjct: 60 VSCISGRDRYECIEKVGKKEADVVAVDPEDMYLAVKDNK 98
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 106 bits (254), Expect = 3e-25
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Frame = -2
Query: 739 KACSWAARPWQGLIGHNDVLAKLSPLREKIKQLADAGSSNQPEWFTKVLGLSDKILR--G 566
K C+WAARPWQG + +N V + +++++ L G + +W+ ++ L++K L
Sbjct: 299 KPCTWAARPWQGYMTNNGV-NNVEAVQKELTDLGKLGEEEKADWWKDIMLLNEKTLAVPA 357
Query: 565 RQYSDQSH*LFEQGQLHRSIERGHGAPELVVRLCVTSNVALAKCRAMSVFAFSRDIRPIL 386
++H + + IER GA + ++R C S L KC+A++ A+SRD+RP
Sbjct: 358 PPVLPENH--LKNAKYLDVIERNSGATDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPKY 415
Query: 385 DCVQEASETDCLKSVQDNGSDLASVDDMRVAAAAKKYVLHPV 260
DC E S+ DCLK++++N +DL V V A K+Y P+
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPI 457
Score = 75.4 bits (177), Expect = 5e-16
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Frame = -1
Query: 290 SSKEIRLAPGLPEVYGEKKTPNY----AVAVVKKGTSFNKMEDLRGKKSCHSSY-GTFSG 126
++KE P + E YG T N+ AVAVV K +S NK+EDLR KKSCHS Y +F+G
Sbjct: 448 ATKEYNTVPIIAESYGSGST-NFNERPAVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAG 506
Query: 125 LDAPLYYLINKRIIKPDQCIKNFGDFFSGGSCLPG 21
AP+Y L K +IK + DFFS GSC PG
Sbjct: 507 WTAPIYTLKRKGLIKSE---NEAADFFS-GSCAPG 537
Score = 35.9 bits (79), Expect = 4e-04
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 221 AVAVVKKGTSFNKMEDLRGKKSCHSSYGTFSGLDAPL 111
AVAV+ K N ++ LRG KSCH+ G G P+
Sbjct: 125 AVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPI 161
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -2
Query: 388 LDCVQEASETDCLKSVQDNGSDLASVD--DMRVAAAAKK 278
+ C+ +C++ V +D+ +VD DM +A K
Sbjct: 60 VSCISGRDRYECIEKVGKKEADVVAVDPEDMYLAVKDNK 98
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.6 bits (46), Expect = 4.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 126 STESAVRTVTRF--LSS*IFHLIEGCSFFDDSHSVVRSFLFSVYLWKTGCKTY 278
ST ++RT + +S IF +I F+ V+ SF+ + W+ GC Y
Sbjct: 83 STSKSLRTPSNMFIVSLAIFDIIMA---FEMPMLVISSFMERMIGWEIGCDVY 132
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 588 YQTKSYVADNIPIKAIDYLNKANYTEVLKEVTVLPN 481
Y + DNI + D L + + E+L E VL N
Sbjct: 559 YNVVYKLIDNIKKEIYDILPEVDVEEILGEAKVLQN 594
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 4.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 126 STESAVRTVTRF--LSS*IFHLIEGCSFFDDSHSVVRSFLFSVYLWKTGCKTY 278
ST ++RT + +S IF +I F+ V+ SF+ + W+ GC Y
Sbjct: 83 STSKSLRTPSNMFIVSLAIFDIIMA---FEMPMLVISSFMERMIGWEIGCDVY 132
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 183 LIEGCSFFDDSHSVVRSFLF 242
+I+ CS D S +SF+F
Sbjct: 109 MIDSCSNVDSSDKCEKSFMF 128
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,016
Number of Sequences: 438
Number of extensions: 4431
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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