Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0191
         (670 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E1J4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_Q7RKY1 Cluster: Axonemal heavy chain dynein type 3; n=8...    33   4.7  
UniRef50_Q8IJC7 Cluster: Centrin, putative; n=1; Plasmodium falc...    33   6.2  
UniRef50_P46764 Cluster: Mitochondrial 60S ribosomal protein L5;...    33   6.2  

>UniRef50_A2E1J4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 2215

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 433 KGKKQLHVNQFE*XNVFQLNRSR*LQKKIIL-RSVCLFMSKMLNELNDSPTFLSK 272
           KG     +NQFE    F    S  L+ K IL  SV L  S+ L+   D P FLSK
Sbjct: 790 KGPSNFELNQFENLIYFSSKSSNLLKNKFILGNSVILVESRPLSSYLDYPLFLSK 844


>UniRef50_Q7RKY1 Cluster: Axonemal heavy chain dynein type 3; n=8;
            cellular organisms|Rep: Axonemal heavy chain dynein type
            3 - Plasmodium yoelii yoelii
          Length = 3690

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
 Frame = -2

Query: 588  IEKRPCVFMKTNSIWHGSVYVKKLITIKIYLALHYLYEISPFILKV-SSYSIKKEKN-SF 415
            I+K+     K + +   S+ +  L+    Y +  Y   I   ILK+ + ++IK  KN S 
Sbjct: 2698 IKKKEYFKKKRDLLIGDSIIIASLMNYISYFSYEYRIIIKLKILKILTQFNIKHTKNISI 2757

Query: 414  MSISSNRXMFSN*IDRGSFKKKSF*EVFVYLCLKC*MN*MIAPHFCRSNCAPD*IRNLYA 235
             +   ++      I  G  K K + E  V +      N +I PHF  +N     ++NLY 
Sbjct: 2758 YNFLESKINLERWIAYGLTKSKFYFENIVIMNNSIKYNLLIDPHFIVTNF----LKNLYD 2813

Query: 234  *CE--------FSNFLDNAKVNLNLYRVRMFTY 160
              +         SNF+D  + ++ L  + +FT+
Sbjct: 2814 KKKDVEILRNNSSNFIDKVERSMRLGNIVLFTH 2846


>UniRef50_Q8IJC7 Cluster: Centrin, putative; n=1; Plasmodium
           falciparum 3D7|Rep: Centrin, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 249

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 20/70 (28%), Positives = 39/70 (55%)
 Frame = -2

Query: 624 NQVHISVGTS*NIEKRPCVFMKTNSIWHGSVYVKKLITIKIYLALHYLYEISPFILKVSS 445
           N  HI      +I K+ CV++K  +I++ ++Y+   I + +Y++    +E S  IL +  
Sbjct: 87  NSGHIDYNDFLDISKKICVYIKYYNIYNINIYI---IMLTVYMS----FEKSDAILLLII 139

Query: 444 YSIKKEKNSF 415
           + +KK+K  F
Sbjct: 140 HKLKKKKKKF 149


>UniRef50_P46764 Cluster: Mitochondrial 60S ribosomal protein L5;
           n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
           ribosomal protein L5 - Acanthamoeba castellanii (Amoeba)
          Length = 177

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 525 KKLITIKIYLALHYLYEISPFILKVSSYSIKKE--KNSFMSISSNR 394
           + L  IK+YL + Y+    PFI KV    IKK+  K  F+S+S N+
Sbjct: 46  RSLKFIKLYLMILYISNQKPFIKKVKFSYIKKKILKRFFISVSLNK 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,398,680
Number of Sequences: 1657284
Number of extensions: 9343958
Number of successful extensions: 17302
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17301
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)