Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0191
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 532 LCEETHYDKNLFGLALSLRNI 470
           L E+T YD  L+G++ S + I
Sbjct: 123 LSEDTFYDIRLWGVSFSKKQI 143


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 217 VRKLALSVQIAYSIWSAIASTKMWGYHSIHLTF 315
           +R L+L   + YS+       + W Y   +LT+
Sbjct: 16  IRDLSLYFSVIYSLLRVKRMMRSWYYLLTNLTY 48


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 421 VFFLFNAVRRYLQNKR*YFVKIMQGQIDFYRNEFL 525
           V+F FN+VR   Q+     +++ Q  +D  R E L
Sbjct: 97  VYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESL 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,556
Number of Sequences: 336
Number of extensions: 2660
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)