Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0191
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.8  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   5.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 601 YQLEHRETSVCFHEDEF 551
           YQL +++ +  FHED+F
Sbjct: 45  YQLSNKDYTEVFHEDDF 61


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 162 YRAARDAVPTAYTLNFYAIGNV 97
           YR+A + +  AY   F+A+G +
Sbjct: 212 YRSATEPIDVAYAYLFFAVGKL 233


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 517 HYDKNLFGLALSLRNIT 467
           H+D  LFG+AL + + T
Sbjct: 240 HFDAELFGVALDVASFT 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,799
Number of Sequences: 2352
Number of extensions: 10106
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)