Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0191
         (670 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   8.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   8.0  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 433 FNAVRRYLQNKR*YFVKIMQGQIDF 507
           FN V +Y+   R +F++ M   +DF
Sbjct: 3   FNNVIKYINFDRFFFIEGMTNVLDF 27


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 366 LDRFNWKTLXYS 401
           L+RF W+TL Y+
Sbjct: 35  LERFFWRTLDYA 46


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = -2

Query: 219 NFLDNAKVNLNLYRVRMFTYRAARDAVPTAYTLNFYAIGN 100
           N+ +N  ++++ +  + F      D VP++  +    IGN
Sbjct: 61  NYKNNVPIDVDRWNGKTFVTILRNDGVPSSLNVISNKIGN 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,323
Number of Sequences: 438
Number of extensions: 2890
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)