Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0190
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 123 2e-28
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 122 2e-28
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 122 3e-28
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 119 2e-27
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 118 5e-27
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 116 1e-26
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 107 7e-24
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 73 3e-13
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435... 30 2.2
02_02_0106 + 6814391-6817007,6817086-6817462 29 2.9
08_01_0384 + 3414291-3414508,3414509-3414755,3415864-3416013,341... 29 3.9
04_04_1588 - 34633057-34633824 28 6.8
11_06_0706 + 26460400-26462254,26462499-26462562,26462929-264629... 28 9.0
06_03_1237 + 28602250-28604196 28 9.0
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 123 bits (296), Expect = 2e-28
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = -2
Query: 539 PHKAGSGVKFPVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 360
P + G + F VFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLIMQLLRDN
Sbjct: 174 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDN 233
Query: 359 LTLWTSDTQGDGDE 318
LTLWTSD DG +
Sbjct: 234 LTLWTSDNAEDGGD 247
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/80 (58%), Positives = 57/80 (71%)
Frame = -3
Query: 739 LGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 560
L LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A +I+
Sbjct: 107 LKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIAL 166
Query: 559 AKMQPTHPIRLGLALNFQSF 500
A + THPIRLGLALNF F
Sbjct: 167 ADLPTTHPIRLGLALNFSVF 186
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 122 bits (295), Expect = 2e-28
Identities = 59/78 (75%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = -2
Query: 539 PHKAGSGVKFPVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 360
P + G + F VFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDN
Sbjct: 169 PIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDN 228
Query: 359 LTLWTSD-TQGDGDEPAE 309
LTLWTSD T+ GDE E
Sbjct: 229 LTLWTSDLTEDGGDEVKE 246
Score = 101 bits (242), Expect = 6e-22
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -3
Query: 739 LGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 560
L LLD HL+P ++ ESKVFYLKMKGDY+RYLAE TG R E + AY+ A +I+
Sbjct: 102 LKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIAL 161
Query: 559 AKMQPTHPIRLGLALNFQSF 500
A + PTHPIRLGLALNF F
Sbjct: 162 ADLAPTHPIRLGLALNFSVF 181
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 122 bits (294), Expect = 3e-28
Identities = 56/74 (75%), Positives = 63/74 (85%)
Frame = -2
Query: 539 PHKAGSGVKFPVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 360
P + G + F VFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDN
Sbjct: 179 PIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDN 238
Query: 359 LTLWTSDTQGDGDE 318
LTLWTSD Q DG +
Sbjct: 239 LTLWTSDMQDDGGD 252
Score = 96.7 bits (230), Expect = 2e-20
Identities = 50/101 (49%), Positives = 65/101 (64%)
Frame = -3
Query: 739 LGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 560
L LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R + + AYQ A +I+
Sbjct: 112 LRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAM 171
Query: 559 AKMQPTHPIRLGLALNFQSFIMRY*IRQTRRVNSPNRLSTM 437
++ PTHPIRLGLALNF F +NSP+R T+
Sbjct: 172 KELSPTHPIRLGLALNFSVFYYEI-------LNSPDRACTL 205
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 119 bits (287), Expect = 2e-27
Identities = 54/74 (72%), Positives = 62/74 (83%)
Frame = -2
Query: 539 PHKAGSGVKFPVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 360
P + G + F VFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLIMQLLRDN
Sbjct: 152 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDN 211
Query: 359 LTLWTSDTQGDGDE 318
LTLWTSD DG +
Sbjct: 212 LTLWTSDANDDGGD 225
Score = 103 bits (247), Expect = 1e-22
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -3
Query: 739 LGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 560
L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E + AY+ A +I+
Sbjct: 85 LALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIAL 144
Query: 559 AKMQPTHPIRLGLALNFQSF 500
A + PTHPIRLGLALNF F
Sbjct: 145 ADLAPTHPIRLGLALNFSVF 164
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 118 bits (284), Expect = 5e-27
Identities = 55/74 (74%), Positives = 62/74 (83%)
Frame = -2
Query: 539 PHKAGSGVKFPVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 360
P + G + F VFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDN
Sbjct: 175 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDN 234
Query: 359 LTLWTSDTQGDGDE 318
LTLWTSD D E
Sbjct: 235 LTLWTSDISEDTAE 248
Score = 106 bits (254), Expect = 2e-23
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = -3
Query: 739 LGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 560
L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+
Sbjct: 108 LKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIAL 167
Query: 559 AKMQPTHPIRLGLALNFQSF 500
A++ PTHPIRLGLALNF F
Sbjct: 168 AELPPTHPIRLGLALNFSVF 187
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 116 bits (280), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = -2
Query: 539 PHKAGSGVKFPVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 360
P + G + F VFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDN
Sbjct: 393 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDN 452
Query: 359 LTLWTSD 339
LTLWTSD
Sbjct: 453 LTLWTSD 459
Score = 107 bits (258), Expect = 7e-24
Identities = 50/80 (62%), Positives = 60/80 (75%)
Frame = -3
Query: 739 LGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 560
L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+
Sbjct: 326 LKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIAL 385
Query: 559 AKMQPTHPIRLGLALNFQSF 500
A++ PTHPIRLGLALNF F
Sbjct: 386 AELPPTHPIRLGLALNFSVF 405
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 107 bits (258), Expect = 7e-24
Identities = 50/80 (62%), Positives = 60/80 (75%)
Frame = -2
Query: 539 PHKAGSGVKFPVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 360
P + G + VFY EI+NSPDKACQLAK AFD+A+AEL +L+E++YKDSTLIMQLLRDN
Sbjct: 159 PIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENYKDSTLIMQLLRDN 218
Query: 359 LTLWTSDTQGDGDEPAEGGD 300
L LW SD D D+ E D
Sbjct: 219 LALWNSDMADDADDIRERTD 238
Score = 36.3 bits (80), Expect(2) = 2e-05
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -3
Query: 667 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 581
KGDYYRYLAE TG + V E S AY+
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
Score = 29.5 bits (63), Expect(2) = 2e-05
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 577 AFEISKAKMQPTHPIRLGLALNFQSF 500
A + ++ + PT PIRLGLALN F
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVF 171
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = -2
Query: 494 EILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQG 330
EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+MQLL++NL LWTS+ G
Sbjct: 163 EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSELTG 217
Score = 57.6 bits (133), Expect = 1e-08
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = -3
Query: 739 LGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQ 581
L ++ H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + + S AYQ
Sbjct: 99 LSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>04_04_1354 -
32841778-32841983,32842079-32843093,32843184-32843518,
32843590-32844019,32844155-32844214,32844531-32844651,
32845321-32846132
Length = 992
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 55 SSISAIQCKYRNTKPSKMTQHLILDGTGRSAANDF*HFYKRRLASASVMIPRQTTFSNVT 234
+ +S I+C + KP++ H I G S D + + + P + ++T
Sbjct: 82 TELSGIRCTTSSCKPNETILHTISTNNGTSNCQDTTQSFSLLMECTNHTTPSKPMHPHIT 141
Query: 235 RFLINT--ERTNACA 273
L++T E +N+CA
Sbjct: 142 FQLMHTKIESSNSCA 156
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 256 SRCL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSLTVL 92
S CL +N H S +SSP PT C N+K F KL N ++SL L
Sbjct: 91 SICLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146
>08_01_0384 +
3414291-3414508,3414509-3414755,3415864-3416013,
3416419-3416476,3416556-3416648,3416775-3416807,
3417357-3417448,3417544-3417603,3417729-3417995
Length = 405
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 539 PHKAGSGVKFPVFYYEILNSPDKACQLAKQAFDDAIAELDTLNE 408
P+ A GV+ P+F L +L K D E DTLNE
Sbjct: 159 PYLASYGVENPIFAVIQLAQTTMRSELGKITLDKTFEERDTLNE 202
>04_04_1588 - 34633057-34633824
Length = 255
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 261 KCVCWGECGEILVVAALGRLVAIALSV*RPK 353
+CVCW +++ ALG I +V +PK
Sbjct: 68 RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98
>11_06_0706 +
26460400-26462254,26462499-26462562,26462929-26462981,
26464400-26464401,26464528-26464598,26464938-26465020,
26465065-26465126
Length = 729
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 480 RI*YLIIKDWKFNARPSLMGCVGCIFALLIS 572
R YL + DW + PS+ GC+G + L +S
Sbjct: 566 RFPYLRVVDWTDSFVPSIPGCIGNLIHLRLS 596
>06_03_1237 + 28602250-28604196
Length = 648
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = -3
Query: 736 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKA 557
GL+D + + SKVFY + + Y Y + +A G H ++ +++ +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370
Query: 556 KMQPTHPIRLGL 521
++P H +G+
Sbjct: 371 NVEPNHVTFIGV 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,590,566
Number of Sequences: 37544
Number of extensions: 381610
Number of successful extensions: 1073
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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