Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0189
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1134 + 8994315-8995892 33 0.15
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 33 0.26
03_02_0642 + 10086400-10086505,10086675-10087014,10087072-100871... 31 1.1
10_08_0841 - 20948719-20948919,20949624-20950388,20950475-209510... 30 1.4
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 30 1.9
08_01_0312 + 2764744-2767390,2767632-2767990 30 1.9
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 29 2.5
12_01_0425 + 3347804-3348284,3348544-3348759,3349038-3349588,334... 29 3.3
06_03_0900 - 25789327-25789662 29 3.3
02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385 29 3.3
08_02_1382 + 26565137-26565210,26565330-26565468,26565489-265656... 28 5.7
08_02_0750 + 20786096-20786475,20786689-20786822,20786906-20787057 28 5.7
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 28 5.7
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 28 5.7
02_02_0316 - 8878540-8878605,8880040-8880732,8881270-8881758 28 5.7
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 28 5.7
01_06_0366 - 28779899-28780543,28780813-28781076,28781165-287814... 28 5.7
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 28 5.7
06_01_0801 - 5993726-5994160,5994811-5994969,5995071-5995211,599... 28 7.5
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 28 7.5
12_02_1044 - 25649296-25649730 27 9.9
12_01_0926 + 9178804-9180324,9180612-9181157 27 9.9
10_07_0084 + 12748685-12749146 27 9.9
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 27 9.9
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438... 27 9.9
06_03_0118 + 16836401-16837456,16837558-16837701,16837812-16838231 27 9.9
05_04_0223 - 19192411-19192951,19193363-19193388 27 9.9
05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,210... 27 9.9
04_04_0976 + 29839697-29840350 27 9.9
02_05_0667 + 30739612-30739783,30739872-30739957,30740832-307408... 27 9.9
>01_01_1134 + 8994315-8995892
Length = 525
Score = 33.5 bits (73), Expect = 0.15
Identities = 38/142 (26%), Positives = 52/142 (36%), Gaps = 6/142 (4%)
Frame = +2
Query: 134 PQREESAQVGGRTQRGGKAASLCEHAPGVAI------GRGDQASLLGQLPEGDEETQQQI 295
P + A VGGR GG A+ APGVA D +S L L +
Sbjct: 302 PPADHLATVGGRGGGGGGLAAGFARAPGVAAVATDEEAMSDASSDLFDLESFAASSSFPT 361
Query: 296 RDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWDEVWQWAMQR 475
R R + + D DE + + + A AV S VW A
Sbjct: 362 TCRGRSSRRNSREDDDDDEDLPYGAAAAAAA---AVEPALSECMYAPSEVSVVWSVATAE 418
Query: 476 GGKLDAHMQSLETWTSCSRSCC 541
GG DA S+ ++S + +CC
Sbjct: 419 GGAFDA--ASVANFSSAASACC 438
>05_07_0003 +
26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 272 DEETQQQIRDHERFVRE-LNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWD 448
DE T + ER V+E LN QDK TI +AH + + D ++V++H + Q
Sbjct: 555 DEATSALDMESERVVQEALNRIMQDKT-TIVVAHRLSTIKDADIISVVQHGRVVEQGTHT 613
Query: 449 EV 454
E+
Sbjct: 614 EL 615
>03_02_0642 +
10086400-10086505,10086675-10087014,10087072-10087156,
10088679-10088764,10089154-10089331,10089425-10089624,
10089964-10090297
Length = 442
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +2
Query: 461 WAMQRGGKL---DAHMQSLETWTSCSRSCCSGSPDSRTTCYQWRLSRCLNP*SFSRA 622
WA R KL D ++ SC R+ G PDS + W L CL P FS A
Sbjct: 101 WAYDRSKKLPYTDQTCPYVDRQDSCQRN---GRPDSDYLYWDWHLDDCLLPRLFSYA 154
>10_08_0841 -
20948719-20948919,20949624-20950388,20950475-20951023,
20951097-20951237,20951313-20951519,20951556-20951724,
20951899-20952003,20952087-20952208,20952291-20952412,
20953234-20953516
Length = 887
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 114 LWDSVLILSERKAHKLEGALKEAEKLHRSVNMLLEWLSDAETKLRFS 254
L DS+ + E+ H+ + ALK AE+LHR ++ SD E FS
Sbjct: 467 LIDSMQMEFEQLKHERDNALKHAEELHREKQNMVS-SSDLEWSTEFS 512
>12_02_0133 - 14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 380 SKAHTDAVTVIKHWITIIQSRWDEVWQWAMQRGGKLDAHMQSLETWTSCSRSCCSGSPDS 559
S+ ++ V +I H + R EV WA + GKL+ L+ S + S + D
Sbjct: 1066 SEVNSGTVDLISHTTATLHKRNVEVANWADEVNGKLEQKKIKLDNVGSANSSLSENTSDG 1125
Query: 560 R 562
R
Sbjct: 1126 R 1126
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -3
Query: 238 VSASDSHSRSMFTERCSFSASLSAPSNLCAFLSLRMSTLSHSCFSSLPCWRMLAASSSGT 59
++A+ H + + +++ SAP L A LSLR S+L +L W AA+S+G
Sbjct: 1 MAAAAVHVLLLLLPLATITSASSAPLPLLALLSLR-SSLGDPA-GALRSWTYAAAASAGA 58
Query: 58 VASRSRPVLVTDCICC 11
S + P + C
Sbjct: 59 TRSLAPPWCAWPGVAC 74
>01_02_0042 - 10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 272 DEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWD 448
DE T + ER V++ ++ T+ +AH + + + D + V+K+ + I + + D
Sbjct: 1205 DEATSALDAESERVVQDALDRVMVNRTTVIVAHRLSTIQNADLIAVVKNGVIIEKGKHD 1263
>12_01_0425 +
3347804-3348284,3348544-3348759,3349038-3349588,
3349752-3349815,3349915-3349975,3350271-3350409,
3350561-3350677,3350794-3350971,3351218-3351828
Length = 805
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 223 SHSRSMFTERCSFSASLSAPSNLCAFLSLRMSTLSHSCFSSLPCWRMLAASSSGTVASRS 44
++S F F ASLS PS+ LSL ++T S FSS P + + + + S
Sbjct: 327 ANSTPGFASSSPFGASLSNPSSFSTGLSL-VNTQSAGLFSSSPAFAQQPFTQASSGFGLS 385
Query: 43 RPVLVT 26
P T
Sbjct: 386 TPAFST 391
>06_03_0900 - 25789327-25789662
Length = 111
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 49 WRPPCHWKTPPTSANKAAN*SNCGTVYSSSARGKRTSWR 165
W CHW+ +++ A+ S CG A +R WR
Sbjct: 17 WERQCHWQAAGVASSSAS--SGCGVFDVDEALEQRERWR 53
>02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385
Length = 373
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +2
Query: 167 RTQRGGKAASLCEHAPGVAIGRGDQASLLGQLPEGDEETQQQIRDHERFVRELNEKKQDK 346
R Q A L P + RGDQAS++G E +E +QQ++ E R L + +
Sbjct: 100 RRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSLEAQKRTLLPHHKAR 159
Query: 347 DETITLAHS 373
+ T H+
Sbjct: 160 CDDATPMHN 168
>08_02_1382 +
26565137-26565210,26565330-26565468,26565489-26565603,
26565761-26565828,26565907-26566551,26566927-26567031,
26567115-26567465
Length = 498
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 462 GPCSGAASWTRTCRASRPGPRARGVAAVAHRTREQLAINGD*AAA 596
G +GA T RA+ P PR G AA A R Q+ ++ D AAA
Sbjct: 233 GGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQM-MHDDRAAA 276
>08_02_0750 + 20786096-20786475,20786689-20786822,20786906-20787057
Length = 221
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 9 EQQMQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAE 185
E++++S T R+L+ L +RQ +L+ + + + K++G LKE E
Sbjct: 42 EKELESRELTQRNLKLEAELRSLEPLRQDALQLRSEAGKLQSIRQEMTAKVQGLLKELE 100
>04_04_1331 -
32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 268 FGELAEKRSLVSASDSHSRSMFTERCSFSASLSAPSNLCAFLSLRMST 125
F E+A+ R L AS SRSM + SLS S LS + ST
Sbjct: 611 FQEMAQNRDLGGASTRRSRSMHLTSSLSTKSLSLRSGSLRNLSYQYST 658
>02_02_0682 - 12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 272 DEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSR 442
DE T + ER V+E ++ T+ +AH + + D + VIK+ + + R
Sbjct: 1160 DEATSALDSESERIVQEALDRVMVGRTTVIVAHRLSTITGADKIAVIKNGVVAEEGR 1216
>02_02_0316 - 8878540-8878605,8880040-8880732,8881270-8881758
Length = 415
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 167 RTQRGGKAASLCEHAPGVAIGRGDQASLLGQLPEGDEETQQQIRDHE 307
R Q A L P + RGDQAS++G + + +E QQ +R E
Sbjct: 142 RKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLE 188
>01_06_0371 +
28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 272 DEETQQQIRDHERFVRE-LNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWD 448
DE T + ER V+E LN D+ T+ +AH + + + D ++V++ + Q D
Sbjct: 539 DEATSALDVESERIVQEALNRIMVDRT-TLVVAHRLTTVRNADCISVVQQGKIVEQGPHD 597
Query: 449 EV 454
E+
Sbjct: 598 EL 599
>01_06_0366 -
28779899-28780543,28780813-28781076,28781165-28781431,
28781546-28781774,28781868-28781985,28782229-28782486,
28782585-28782858,28782950-28783475,28784289-28784527,
28784626-28784847,28784912-28784914,28785124-28785299,
28786147-28786201,28786288-28786557
Length = 1181
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 272 DEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIK 415
DE T + ER V+E + + T+ +AH + + + D +TV++
Sbjct: 534 DEATSALDVESERIVQEALNRMMVERTTLVVAHRLSTVRNVDCITVVR 581
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -3
Query: 199 ERCSFSASLSAPSNLCA-FLSLRMSTLSHSCFSSLPCWRMLAAS-SSGTVASRSRPVLVT 26
+ C FS S AP +C FL+L+ +SC S ++++S +SG + +R
Sbjct: 998 DTCHFSHSSRAPRPICKFFLTLQGCRNGNSCSFSHDSGSLVSSSITSGICSQENR----A 1053
Query: 25 DCICCSR 5
+CC R
Sbjct: 1054 TSVCCKR 1060
>06_01_0801 - 5993726-5994160,5994811-5994969,5995071-5995211,
5995999-5996097,5996180-5996542,5996929-5997150,
5997257-5997448,5997997-5998056,5998162-5998378,
5998471-5998523,5999013-5999084,5999928-6000113,
6000986-6001132,6002902-6003075,6003149-6003300,
6004269-6004360,6004549-6004710,6004875-6005053,
6005173-6005304,6005454-6005507,6006082-6006191,
6006317-6006487,6006577-6006663,6008488-6008611,
6009355-6009564
Length = 1330
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 179 GGKAASLCEHAPGVAIGRGDQASLLGQLPEGDEETQQQIR 298
GGK + E A AIG A+L P G E Q+QIR
Sbjct: 946 GGKLREITEEAKAFAIGNKALAALFVHTPAG--ELQRQIR 983
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 137 QREESAQVGGRTQRGGKAASLCEHAPGVAIGRGDQAS--LLGQLPEGDEETQQQIRDHER 310
QR+E+ + R Q+ + + + V + R ++ + LLGQL + E + + +H++
Sbjct: 371 QRKETEESLSRVQQEFEQLKIQQDEVTVELQRVNEQNENLLGQLSDSREHFEWLLSEHDQ 430
Query: 311 FVRELNEKKQDKDE 352
+RE + ++ +E
Sbjct: 431 LLRERDNAVREVEE 444
>12_02_1044 - 25649296-25649730
Length = 144
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 76 PPTSANKAAN*SNCGTVY-SSSARGKRTSWRAHSKR 180
PP A++A + CG + S+S G TSW +R
Sbjct: 109 PPVKASRAHGCTECGVEFDSASTYGGTTSWAPRLRR 144
>12_01_0926 + 9178804-9180324,9180612-9181157
Length = 688
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 188 AASLCEHAPGVAIGRGDQASLLGQLPEGDEETQQQIRDHERFVRELNEKKQDKDETI 358
AA + EH + I Q L L E ++ ++++ V+E NEK +++DE +
Sbjct: 476 AAEILEH---LYIRYTKQDGYLNNLTEAMKDVLPKVKEENEKVKEENEKVKEQDEKV 529
>10_07_0084 + 12748685-12749146
Length = 153
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -1
Query: 492 ASSLPPRCMAHCHTSSQRLCMMVIQCLMTV 403
AS + +CH + C+++ CL+TV
Sbjct: 92 ASEMASNAGQNCHNGKNQYCLVLTHCLLTV 121
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 259 LAEKRSLVSASDSHSRSMFTERCSFSASLSAPSNLCAFLSLRMSTLSHSCFSSLPCWRML 80
LA +L ++HS + E+ S S + S+ + L++ T + +CF SLP +R+
Sbjct: 47 LASSAALALQLNAHSSTK--EQQSSSCNYSSRAGCYLHPYLKLKTSAATCFGSLPPFRIA 104
Query: 79 A 77
A
Sbjct: 105 A 105
>08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,
4381944-4382047,4382127-4382259,4384477-4384653,
4385164-4385309,4385536-4385625,4385703-4385915,
4386090-4386182,4386743-4386937,4387018-4387110,
4387924-4388019,4388556-4388985,4389424-4390091,
4392074-4392271,4392690-4393407,4394036-4394181
Length = 1628
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 260 AGREAKLGLRVR*PL-QEHVHRAMQLFRLFECALQLVRFPLAEDEYTVP 117
AG+EA +RV + +E++ A ++ LF C L VR P+ E + P
Sbjct: 1123 AGQEATARIRVEHIIREENMMAAQEILELF-CELIAVRLPIIETQKECP 1170
>06_03_0118 + 16836401-16837456,16837558-16837701,16837812-16838231
Length = 539
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 42 RDLEATVPLEDAANIRQQGSELKQLWDSV-LILSERKAH-KLEGALKEAEKLHRSVNMLL 215
RD+ + +P DAA + ++LW S L+L++ AH K G ++L R+ +LL
Sbjct: 65 RDILSRLPARDAARTSALSTRWRRLWRSAPLVLAD--AHLKHTGRAPGPDELDRTGGLLL 122
Query: 216 EWLSDAETKLRFSASS 263
+ R +S+
Sbjct: 123 RAMDGMRDVARMVSSA 138
>05_04_0223 - 19192411-19192951,19193363-19193388
Length = 188
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 471 SGAASWTRTCRASRPGPRAR 530
S +ASWT + RP PRAR
Sbjct: 144 SSSASWTARWQGRRPAPRAR 163
>05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,
2107120-2107645,2107817-2108090,2108197-2109056,
2109201-2109467,2109711-2109974,2110063-2110356,
2110455-2110814
Length = 1276
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 272 DEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWD 448
DE T + ER V++ ++ T+ +AH + + D + V+K+ + I + + D
Sbjct: 1194 DEATSALDAESERVVQDALDRVMMNRTTVIVAHRLSTIQGADMIAVVKNGMIIEKGKHD 1252
>04_04_0976 + 29839697-29840350
Length = 217
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 109 SNCGTVYSSSARGKRTSWRAHSKRRKS 189
S CG Y SS +G+R RAHS R+S
Sbjct: 186 SRCGKSYRSS-QGRRRDSRAHSPGRRS 211
>02_05_0667 +
30739612-30739783,30739872-30739957,30740832-30740837,
30741521-30741586,30741664-30741834,30742032-30742202,
30742457-30742612,30742705-30742851,30742964-30743035,
30743122-30743652,30743739-30743926,30744781-30744838
Length = 607
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 293 IRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWDEVWQWAMQ 472
+RD++R V+E+NE+++ D + A ++ AV V W + V QW +
Sbjct: 265 VRDYQRKVQEMNEERKILDRELARAKVTANRV---AVVVANEW-KDANDKVMPVKQWLEE 320
Query: 473 RGGKLDAHMQSL 508
R L MQ L
Sbjct: 321 R-RFLQGEMQQL 331
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,717,364
Number of Sequences: 37544
Number of extensions: 342683
Number of successful extensions: 1684
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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