Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0189
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_5418| Best HMM Match : Spectrin (HMM E-Value=1.50001e-40) 39 0.003
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 39 0.004
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 39 0.004
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.089
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 33 0.15
SB_29386| Best HMM Match : Spectrin (HMM E-Value=1.9e-29) 33 0.27
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 31 0.62
SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 31 1.1
SB_38746| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 30 1.4
SB_12456| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25) 30 1.4
SB_41325| Best HMM Match : SWIM (HMM E-Value=0.015) 30 1.4
SB_37473| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_11912| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26) 30 1.4
SB_26395| Best HMM Match : TSP_1 (HMM E-Value=3.5e-09) 30 1.9
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0) 30 1.9
SB_15107| Best HMM Match : Spectrin (HMM E-Value=1.8e-13) 30 1.9
SB_7706| Best HMM Match : Spectrin (HMM E-Value=0) 30 1.9
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 29 3.3
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 29 4.4
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_57867| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 28 5.8
SB_11295| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_30856| Best HMM Match : TSP_1 (HMM E-Value=5.9e-09) 28 7.7
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 28 7.7
SB_51907| Best HMM Match : Spectrin (HMM E-Value=0.023) 28 7.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_11695| Best HMM Match : CHASE3 (HMM E-Value=1) 28 7.7
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 64.5 bits (150), Expect = 7e-11
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +2
Query: 251 LGQLPEGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITI 430
LG + E EE ++Q+ H F EL +++ + + IL H A+ +I+ W+
Sbjct: 5753 LGPIAEDLEEIKEQMEKHRVFHDELKQEEVNVQSAVKKGQVILRFCHPSAIQIIQQWLAR 5812
Query: 431 IQSRWDEVWQWAMQRGGKLDAHMQSL 508
++ RWDEVW+W+ QR +L+ ++ L
Sbjct: 5813 LKKRWDEVWKWSSQRLMRLEEELRKL 5838
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +3
Query: 6 REQQMQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAE 185
RE QSV K GR + +E+ A + ++ ++L+ WD+V +S K +LE AL A+
Sbjct: 5671 REANYQSVMKAGRAMINENKVEEPAALEEKLADLRMRWDAVYAMSNTKQDRLENALVLAK 5730
Query: 186 KLHRSVNMLLEWLSDAETKLR 248
+ SV L L E LR
Sbjct: 5731 EFDSSVKTELHILKQFEENLR 5751
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = +3
Query: 18 MQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEKLHR 197
+ + K G+ L EDA I + ++LK WD+V LS + KLE AL
Sbjct: 5566 LDATVKMGKQLMDRSLDEDAITIEGKIADLKARWDAVCGLSVERQQKLEEALLFTGMFQD 5625
Query: 198 SVNMLLEWLSDAETKL 245
++ LL+WL E L
Sbjct: 5626 ALQSLLDWLFAVEPSL 5641
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 72 DAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEKLHRSVNMLLEWLSDAETKLR 248
D+ + + ELK WD+VL S ++ +LE ALK++ + L WL++A L+
Sbjct: 5118 DSTALEGKVQELKTTWDAVLAKSAQRQAELEKALKDSHSFMSQIKELRGWLNEASEFLK 5176
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 3 SREQQMQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEA 182
+R++ + + +L T AA++++Q ELK W+ V + ++ KLE AL A
Sbjct: 5353 TRQKIYVQIVEVVENLIDTADPTTAASLQRQLDELKTSWEQVTSRAAEESEKLEQALTNA 5412
Query: 183 EKLHRSVNMLLEWLS 227
L + + +WL+
Sbjct: 5413 TSLEAQTSDMDQWLT 5427
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 9 EQQMQSVTKTGRD-LEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAE 185
E + V+ G D LE+ E+ +++ + +++Q W SV + K +L+ + A+
Sbjct: 1962 EPVFEKVSSCGNDVLESLEAGEEKDDLKGKLDDMEQRWKSVKENFDEKKDQLDEVVPVAK 2021
Query: 186 KLHRSVNMLLEWLSDAETKL 245
H M EWL +AE L
Sbjct: 2022 AYHDLSQMFQEWLQNAEKYL 2041
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 SREQQMQSVTKTGRDL-EATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKE 179
+ E ++ K G L EA+ E+ N+ ++ +++ + WD + S ++ L+ A+
Sbjct: 3680 NNEPSYAALMKAGESLKEASQSAEEQDNLDEKVADISRRWDELKSKSNERSSLLDDAISA 3739
Query: 180 AEKLHRSVNMLLEWLSDAETK 242
+ + + WL +A+ K
Sbjct: 3740 VAEFQNLRDKFVSWLEEADKK 3760
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 6 REQQMQSVTKTGRDL-EATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEA 182
+E + + ++G +L E P + + + + K+ W+ + + ++ A+ EA
Sbjct: 3242 QEPGYEQLMRSGANLLETADPGPERDELEAKLNNTKERWEDIQQKAVDHQERINTAVPEA 3301
Query: 183 EKLHRSVNMLLEWLSDAETKL 245
K + +V L+ WL + E +L
Sbjct: 3302 TKYNEAVKTLVPWLEETEAQL 3322
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +3
Query: 9 EQQMQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEK 188
+ ++ + + G + ED+ + Q E+ WD + S + KLE AL + +
Sbjct: 4987 QSEITQINQLGSTVGERCRHEDSELVHAQLEEVNHRWDELCNHSTGRQQKLEEALLQLGQ 5046
Query: 189 LHRSVNMLLEWLSDAETKL 245
+ LL WL ++ L
Sbjct: 5047 FQLAFQELLVWLRQTDSTL 5065
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +3
Query: 9 EQQMQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEK 188
E +QS K G+ + I+Q + LK+ WD V S ++ +LE L++ +
Sbjct: 5781 EVNVQSAVKKGQVILRFCHPSAIQIIQQWLARLKKRWDEVWKWSSQRLMRLEEELRKLAE 5840
Query: 189 LHRSVNMLLEWLSDAETKLRFSASSP 266
+ LL W+ E L P
Sbjct: 5841 EDELMGELLRWIQTKEEALAEKEKEP 5866
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +3
Query: 48 LEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEKLHRSVNMLLEWLS 227
L + P ++ + + ++L+ WD++ S + LE A++ +V ++ WL
Sbjct: 241 LTTSEPGKERNKVEHRMAQLQTRWDNLQKDSSNRQMVLEKVEPLAQQYTAAVREIVPWLM 300
Query: 228 DAETKLRFSASSP 266
AE KL S P
Sbjct: 301 VAEKKLSSINSVP 313
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 PEGDE--ETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQ 436
P G E Q+Q++ H+ F EL + + + L ++ + + ++ + +
Sbjct: 4961 PVGTELATVQEQLKLHKAFHAELTPHQSEITQINQLGSTVGERCRHEDSELVHAQLEEVN 5020
Query: 437 SRWDEVWQWAMQRGGKLDAHMQSL 508
RWDE+ + R KL+ + L
Sbjct: 5021 HRWDELCNHSTGRQQKLEEALLQL 5044
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/72 (18%), Positives = 39/72 (54%)
Frame = +3
Query: 18 MQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEKLHR 197
++S+ + G+ L T+ + ++++ +L + W ++ L+++ ++E + E + +
Sbjct: 3337 VESIIEQGKSLSGTLSENERDEVQKELKQLSERWSNLQTLADQSGSEMEQCIAEQSEYYH 3396
Query: 198 SVNMLLEWLSDA 233
+ ++WL DA
Sbjct: 3397 ELERCVDWLQDA 3408
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 263 PEGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSI-LSKAHTDAVTVIKHWITIIQS 439
P + E +QQ+++ E F ++ + I + L + + + ++ +
Sbjct: 1989 PRNEAEAKQQLKELEEFQAAFKTRQSSFESVIKEGREVRLKSSQGKSSDELNEKLSHLTD 2048
Query: 440 RWDEVWQWAMQR 475
RWDE+ +WA R
Sbjct: 2049 RWDEMLRWAAGR 2060
>SB_5418| Best HMM Match : Spectrin (HMM E-Value=1.50001e-40)
Length = 514
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 72 DAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEKLHRSVNMLLEWLSDAETKLR 248
D+ + + ELK WD+VL S ++ +LE ALK++ + L WL++A L+
Sbjct: 272 DSTALEGKVQELKTTWDAVLAKSAQRQAELEKALKDSHSFMSQIKELRGWLNEASEFLK 330
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +3
Query: 9 EQQMQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEK 188
+ ++ + + G + ED+ + Q E+ WD + S + KLE AL + +
Sbjct: 141 QSEITQINQLGSTVGERCRHEDSDLVHAQLEEVNHRWDELCNHSTGRQQKLEEALLQLGQ 200
Query: 189 LHRSVNMLLEWLSDAETKL 245
+ LL WL ++ L
Sbjct: 201 FQLAFQELLVWLRQTDSTL 219
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/58 (20%), Positives = 31/58 (53%)
Frame = +3
Query: 72 DAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEKLHRSVNMLLEWLSDAETKL 245
D A+++ + + + + W+ + +++ +L +E+ H+ ++L WL + E KL
Sbjct: 53 DRAHVQSELNAVTEQWEGIEKGWQKRRGELVEVKVTSEQYHKLFEVILVWLDELELKL 110
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 PEGDE--ETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQ 436
P G E Q+Q++ H+ F EL + + + L ++ + + ++ + +
Sbjct: 115 PVGTELATVQEQLKLHKAFHAELTPHQSEITQINQLGSTVGERCRHEDSDLVHAQLEEVN 174
Query: 437 SRWDEVWQWAMQRGGKLDAHMQSL 508
RWDE+ + R KL+ + L
Sbjct: 175 HRWDELCNHSTGRQQKLEEALLQL 198
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 15 QMQSVTKTGRDLEATVPLEDAA--NIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEK 188
++Q++ KTG DL ED + +I+QQ ++ + W+ + + H LE + + ++
Sbjct: 1539 RLQTLHKTGEDLLRDGDPEDPSTKDIQQQLADFDECWNDLAKQVIERIHTLESSQSKLKE 1598
Query: 189 LHRSVNMLLEWLSDAE 236
H + + +W+ D E
Sbjct: 1599 FHEEMAAVSDWMDDVE 1614
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 257 QLPEGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQ 436
++ G + Q+Q +H+RF E+ E T+ L I ++V + + +
Sbjct: 1412 EIGPGYDAVQKQQDEHQRFQDEIREHSMI---TVILELDITDPTINESV---QGQVKNLS 1465
Query: 437 SRWDEVWQWA 466
RW VW+WA
Sbjct: 1466 ERWASVWRWA 1475
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 203 EHAPGVAIGRGDQASLLGQLPEGDEETQQQIRDHERFVRELNEKKQDKDETITLA 367
E AP V + ++AS+LG + E EET++ + +HE V KK +++ T+A
Sbjct: 1707 EEAPAVVVALSEKASVLG-ISEEREETEETVEEHEEVVESEEGKKVEEEGVPTVA 1760
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 203 EHAPGVAIGRGDQASLLGQLPEGDEETQQQIRDHERFVR-ELNEKKQDKD 349
E AP V + ++AS LG E ++ET++ + HE V E EK ++++
Sbjct: 1611 EEAPAVVVALSEEASALGISEEIEKETEETVEQHEEVVESEAGEKVEEEE 1660
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 203 EHAPGVAIGRGDQASLLGQLPEGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSILS 382
E P V + ++AS LG E ++ET++ + +HE V ++ +++E + ++
Sbjct: 1659 EEVPAVVVALSEEASALGISEEIEKETEETVEEHEEDVESEEGEEVEEEEAPAVVVALSE 1718
Query: 383 KA 388
KA
Sbjct: 1719 KA 1720
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 34.3 bits (75), Expect = 0.089
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 9 EQQMQSVTKTGRDLE--ATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEA 182
++ + +V G +L A L +A+ I+++ + L +D+V ER+ KLE + A
Sbjct: 1379 KEDLDNVNSEGNNLVHMADSQLVNASPIQEELAALNSRFDAVRQNLEREEDKLENVISNA 1438
Query: 183 EKLHRSVNMLLEWLSDA 233
E ++N WL +A
Sbjct: 1439 EDFEGALNTFESWLPEA 1455
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/67 (19%), Positives = 30/67 (44%)
Frame = +2
Query: 275 EETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWDEV 454
E +QQ+ H++F L +++Q + + + A + ++ + ++ RW V
Sbjct: 619 EAVRQQVEQHKKFQENLEQQQQKVNSLTHMVVVVEDNAAENVTADLEEQLAVLGERWSGV 678
Query: 455 WQWAMQR 475
+W R
Sbjct: 679 CRWTEMR 685
Score = 31.1 bits (67), Expect = 0.83
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = +3
Query: 9 EQQMQSVTKTGRDLEATVPLEDAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEK 188
++++ S+ +TG + + A+ +R Q ++ WD+++ L+ R L AL++ +K
Sbjct: 1191 QRKLDSLNETGTYMLSKAESTYASRLRDQLDDVTVRWDALVRLAGRVKDNLMAALEKYQK 1250
Query: 189 -LHRSVNMLLEWLSDA----ETKLRFSASSP 266
L + ++E S A + +L+FS+ P
Sbjct: 1251 WLSAGIIRIMESESGADQCGDLQLKFSSGIP 1281
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +2
Query: 248 LLGQLPE-GDEET-QQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHW 421
L Q+P GD ET + Q+ E ++++ ++ D +LSKA + + ++
Sbjct: 1160 LKDQVPAAGDPETLEAQLDQSEALQGDISKLQRKLDSLNETGTYMLSKAESTYASRLRDQ 1219
Query: 422 ITIIQSRWDEVWQWAMQRGGKLDAHMQSLETWTS 523
+ + RWD + + A + L A ++ + W S
Sbjct: 1220 LDDVTVRWDALVRLAGRVKDNLMAALEKYQKWLS 1253
>SB_29386| Best HMM Match : Spectrin (HMM E-Value=1.9e-29)
Length = 181
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 84 IRQQGSELKQLWDSVLILSERKAHKLEGALKEAEKLHRSVNMLLEWLSDAETKLRFS 254
I++ +L Q W + ++E++ L+ A +E +K HR + W+S+ +T L S
Sbjct: 97 IQEMIEKLTQKWTDLNQMAEQRKDNLDSA-QEIQKFHRDADDTKAWISEKDTALSSS 152
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +2
Query: 140 REESAQVGGRTQRG-GKAASLCEHAPGVAIGRGDQASLLGQLPEGDEET---QQQIRDHE 307
+E + G Q +A+ + EH+ V + + + A+L + +++ Q+ ++ E
Sbjct: 466 KERGEVIAGLEQTNYSQASKISEHSEDVVVKQENVAALTKAVVSKEQQLLNLDQKNKEKE 525
Query: 308 RFVRELNEKKQDKDETIT 361
+ E+N++ Q+K ETIT
Sbjct: 526 VVILEMNKRIQEKKETIT 543
>SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1495
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 479 GKLDAHMQSLETWTSCSRSCCSGSPDSRTTCYQWRLSRCLNP 604
G ++ + WT+C+R+C +G+ QWR+ C NP
Sbjct: 350 GPVNGNFTEWTKWTTCTRTCGTGT--------QWRMRTCTNP 383
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 485 LDAHMQSLETWTSCSRSCCSGSPDSRTTC 571
LD + WT+C+R+C +G+ TC
Sbjct: 412 LDGNFTEWTKWTTCTRTCGTGAQMRMRTC 440
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 485 LDAHMQSLETWTSCSRSCCSGSPDSRTTCYQWRLSRCLNP 604
+D + +W++C+R+C +G+ QWR+ C P
Sbjct: 292 VDGNFTEWTSWSTCTRTCGAGT--------QWRMRTCTKP 323
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 236 DQASLLGQLPEGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSI-LSKAHTDAVTVI 412
++A ++ EG + QQ + + +RE+N+K +D + I AH K + +
Sbjct: 692 ERARAAMRVTEGMQREQQSLIEQLDMLREINQKLRDDRDAIEAAHQAGKKKVNRQGSKMS 751
Query: 413 KHW 421
K+W
Sbjct: 752 KYW 754
>SB_38746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 444 GTRYGNGPCSGAASWTRTCRASRP-GPRARGVAAVAHRTREQLAIN 578
GT+ N C W + CR+++P GP RG +R + + IN
Sbjct: 70 GTKCSN--CGKPNHWAKVCRSTKPQGPTPRGRGRRGNRNKSKQQIN 113
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 45 DLEATVPLEDAANIRQQGSELKQLW-DSVLILSERKAHKLEGALKEAEKLHRSVNMLLEW 221
D E + A++ ++ + L+ LW D+ +L E K H + + + HR+ LL W
Sbjct: 1012 DKERSADSPYRASLEEKLNNLRPLWKDACRLLDEYKDH-VSHQSERSRMFHRTCKQLLMW 1070
Query: 222 LSDAETKLRF 251
+ E+ F
Sbjct: 1071 MDGLESHTGF 1080
>SB_12456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 137 QREESAQVGGR--TQRGGKAASLCEHAPGVAIGRGDQASLLGQLPEGDEETQQQIRDHER 310
QR +GGR G K+ EH G + ++ LL + E +EE +++ + E
Sbjct: 32 QRLRIFTLGGRHGNPGGTKSGRSWEHTTGGGVRSEEEDELLIKEEEEEEEEEEEEEEEEE 91
Query: 311 FVRELNEKKQDKDE 352
E E++++++E
Sbjct: 92 EEEEEEEEEEEEEE 105
>SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)
Length = 1238
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 444 GTRYGNGPCSGAASWTRTCRASRP-GPRARGVAAVAHRTREQLAIN 578
GT+ N C W + CR+++P GP RG +R + + IN
Sbjct: 231 GTKCSN--CGKPNHWAKVCRSTKPQGPAPRGRGRRGNRNKSKQQIN 274
>SB_41325| Best HMM Match : SWIM (HMM E-Value=0.015)
Length = 950
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2
Query: 215 QEHVHRAMQLFRLFECALQLVRF 147
Q+H+H A QLFRL + AL+L F
Sbjct: 597 QKHIHSASQLFRLAQDALKLAGF 619
>SB_37473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 444 GTRYGNGPCSGAASWTRTCRASR-PGPRARGVAAVAHRTREQLAIN 578
GT+ N C W + CR+++ PGP RG +R + + IN
Sbjct: 162 GTKCSN--CGKPNHWAKVCRSTKPPGPTPRGRGRRGNRNKSKQQIN 205
>SB_11912| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26)
Length = 1329
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 444 GTRYGNGPCSGAASWTRTCRASRP-GPRARGVAAVAHRTREQLAIN 578
GT+ N C W + CR+++P GP RG +R + + IN
Sbjct: 231 GTKCSN--CGKPNHWAKVCRSTKPQGPTPRGRGRRGNRNKSKQQIN 274
>SB_26395| Best HMM Match : TSP_1 (HMM E-Value=3.5e-09)
Length = 250
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +2
Query: 449 EVWQWAMQRGGKLDAHMQSLETWTSCSRSCCSGSPDSRTTCYQ----WRLSRCLNP 604
EV+ + K+D W+ C+R C GS TC W +C+ P
Sbjct: 157 EVFYEFKSKPEKVDGGWTEFSEWSKCTRVCGKGSSTRNRTCTNPEPAWGGKKCVGP 212
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 251 LGQLPEGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIK 415
+ E + E + Q+R E EL + ++K+E++ LA+ LS+ + +V K
Sbjct: 1440 IANFSERETELESQVRALESQCEELEYRVKEKEESLLLANEKLSEKDAEIASVEK 1494
>SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 818
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +2
Query: 449 EVWQWAMQRGGKLDAHMQSLETWTSCSRSCCSGSPDSRTTCYQ----WRLSRCLNP 604
EV+ + K+D W+ C+R C GS TC W +C+ P
Sbjct: 749 EVFYEFKSKPEKVDGGWTEFSEWSKCTRVCGKGSSTRNRTCTNPEPAWGGKKCVGP 804
>SB_15107| Best HMM Match : Spectrin (HMM E-Value=1.8e-13)
Length = 143
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 266 EGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRW 445
+ E I+ HE F R L +++ + A ++++ H D+ VI I + +RW
Sbjct: 20 DAGEGADALIKKHEDFTRALTVQEEKIGKLKENADTLIAADHYDS-PVIAERIAAVLARW 78
Query: 446 DEVWQWAMQRGGKL 487
+ Q ++R KL
Sbjct: 79 ATLKQALVERRSKL 92
>SB_7706| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 686
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 266 EGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRW 445
+ E I+ HE F R L +++ + A ++++ H D+ VI I + +RW
Sbjct: 14 DAGEGADALIKKHEDFTRALTVQEEKIGKLKENADTLIAADHYDS-PVIAERIAAVLARW 72
Query: 446 DEVWQWAMQRGGKL 487
+ Q ++R KL
Sbjct: 73 ATLKQALVERRSKL 86
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/56 (23%), Positives = 32/56 (57%)
Frame = +3
Query: 72 DAANIRQQGSELKQLWDSVLILSERKAHKLEGALKEAEKLHRSVNMLLEWLSDAET 239
+A I+ + L++ WD + L++ + HKL+ +L ++ +V+ + W+++ T
Sbjct: 346 NADEIKARVDGLQEKWDELKSLADARQHKLDDSL-AYQQFGANVDEEISWINEKNT 400
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +2
Query: 296 RDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWDEVWQWAMQR 475
+ H+R E+N + + + + H +A IK + +Q +WDE+ A R
Sbjct: 313 KKHQRLEAEINNHEPRIAAVTECGNKFVEEGHGNA-DEIKARVDGLQEKWDELKSLADAR 371
Query: 476 GGKLD 490
KLD
Sbjct: 372 QHKLD 376
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +2
Query: 458 QWAMQRGGKLDAHMQSLETWTSCSRSCCSGSPDSRTTC 571
+W + ++D WT CSRSC +G C
Sbjct: 362 EWCNDKPCEVDGGYSQWSPWTPCSRSCQAGVVSRHRIC 399
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 515 WTSCSRSCCSGSPDSRTTCYQ 577
W+SCSRSC +G+ TC Q
Sbjct: 744 WSSCSRSCNNGTMFRNRTCSQ 764
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 515 WTSCSRSCCSGSPDSRTTC 571
WTSCS SC G SR C
Sbjct: 331 WTSCSSSCGGGKRRSRRAC 349
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 356 ITLAHSILSKAHTDAVTVIKHWITIIQSRWDEVWQWAMQRGGKL--DAHMQSLETWTSCS 529
+ +AH++L AH AV + H + + V ++ + DAH+ L SC
Sbjct: 69 LRVAHAVLRVAH--AVLRVAHAVLRVAHAVLRVAHTVLRIAHAVLRDAHVVLLMPCCSCR 126
Query: 530 RSCCSGSPDSRTTCYQWRLSRC 595
+CCS R CY R+ C
Sbjct: 127 IACCS----CRVVCYSCRVVFC 144
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 46 TWRPPCHWKTPPTSANKAAN*SNCGTVYSSSARGKRTS 159
TW PCH T P K C V+ S+AR K TS
Sbjct: 397 TWYLPCHGVTNPNKPGK------CRVVFDSAARYKGTS 428
>SB_57867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +2
Query: 461 WAMQRGGKLDAHMQSLETWTSCSRSCCSGSPDSRTTC 571
W + +D H W +CS+SC GS C
Sbjct: 536 WENIQPAPVDGHWGRWSAWGTCSKSCDKGSQTRTRQC 572
>SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 91 WRMLAASSSGTVASRSRPVLVTDCICCSRE 2
WR LAA S TV +SR +C+C +R+
Sbjct: 300 WRNLAAKSYPTVDMKSRTWGSVNCMCITRQ 329
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +2
Query: 275 EETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKAHTDAVTVIKHWITIIQSRWDEV 454
EE Q + E F +EL+ ++ L +++ K H ++ IK I + +RW +
Sbjct: 87 EECQVIEQRFEGFQQELDANERRVQLVNELGGNLIEKGHINS-DEIKETIDRLNTRWCNL 145
Query: 455 WQWAMQRGGKLD 490
A Q+ KLD
Sbjct: 146 RDTANQKRAKLD 157
>SB_11295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 78 ANIRQQG-SELKQLWDSVLILSERKAHKLEGALKEAEKLHRSVNMLLEWLSDAETKLRFS 254
AN+ Q ++++ L +++ +LSER +HK ++++ E L V L D+ET +
Sbjct: 202 ANLPQDSVADIESLDETMSLLSERVSHKEYSSIEDKESLLNGVTRGLT-QKDSETSVTSL 260
Query: 255 ASS 263
SS
Sbjct: 261 GSS 263
>SB_30856| Best HMM Match : TSP_1 (HMM E-Value=5.9e-09)
Length = 197
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 449 EVWQWAMQRGGKLDAHMQSLETWTSCSRSCCSGSPDSRTTC 571
EV+ + K+D W+ C+R C GS TC
Sbjct: 48 EVFYEFKSKPEKVDGGWTEFSEWSKCTRVCGKGSSTRNRTC 88
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 230 RGDQASLLGQLPEGDEETQQQIRDHE-RFVRELNEKKQDKDETI 358
RG++ Q P GDEE++ Q D E + +EK +D E +
Sbjct: 139 RGEKVDSSTQTPRGDEESKNQETDGEDKDEASKDEKDEDPKEDV 182
>SB_51907| Best HMM Match : Spectrin (HMM E-Value=0.023)
Length = 231
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/44 (27%), Positives = 27/44 (61%)
Frame = +2
Query: 257 QLPEGDEETQQQIRDHERFVRELNEKKQDKDETITLAHSILSKA 388
+LP+ EET++Q+++ E F E+ E+ ++ +S+L ++
Sbjct: 154 KLPDTREETERQLKNIEDFQEEMMEEFPGVKASVDYGNSLLDES 197
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -1
Query: 549 EPLQQLLEHEVQVSRLCMCASSLPPRCMAHCHTSSQRLC 433
+P+Q+ EH ++C +S P C HC + C
Sbjct: 1275 KPIQENREHSQSCPKICF--TSCKPSCPVHCCSEHSNAC 1311
>SB_11695| Best HMM Match : CHASE3 (HMM E-Value=1)
Length = 562
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 44 GPGGHRATGXXXXXXXXXXXXEATVGQCTHPQREESAQVGGRTQRGGKAASLCEHA 211
G GG +AT ++TV + Q+++ GG++Q GGK A E A
Sbjct: 487 GVGGKKATSTFRAAQMKR---QSTVDKLMGQQKQQQQPGGGQSQLGGKVAKALEKA 539
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,945,667
Number of Sequences: 59808
Number of extensions: 349015
Number of successful extensions: 1746
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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