Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0187
(810 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 51 6e-06
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 31 3.7
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 31 3.7
EF623992-1|ABR25252.1| 354|Homo sapiens Uba6-specific E2 conjug... 31 6.5
BC139832-1|AAI39833.1| 658|Homo sapiens JPH1 protein protein. 30 8.6
BC114464-1|AAI14465.1| 658|Homo sapiens JPH1 protein protein. 30 8.6
BC113856-1|AAI13857.1| 658|Homo sapiens JPH1 protein protein. 30 8.6
BC098299-1|AAH98299.1| 658|Homo sapiens JPH1 protein protein. 30 8.6
BC049372-1|AAH49372.1| 556|Homo sapiens JPH1 protein protein. 30 8.6
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 50.8 bits (116), Expect = 6e-06
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +1
Query: 499 KKQLAMNAWLPQASYPCGNFSGTSC*K 579
K +AMNAW PQASYPCGNFS TSC K
Sbjct: 11 KSDVAMNAWPPQASYPCGNFSDTSCLK 37
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 305 HALGRAAGGAKLPSAGLA*TPLRPKPA*PNPARICSLWSPESRE 174
H A G P++ TP P P P PA +CS SPE R+
Sbjct: 51 HLQAFAQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 305 HALGRAAGGAKLPSAGLA*TPLRPKPA*PNPARICSLWSPESRE 174
H A G P++ TP P P P PA +CS SPE R+
Sbjct: 51 HLQAFAQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92
>EF623992-1|ABR25252.1| 354|Homo sapiens Uba6-specific E2
conjugating enzyme 1 protein.
Length = 354
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -2
Query: 308 VHALGRAAGGAKLPSAGLA*TPLRPKPA*PNPARICSLWSP 186
V A AAGGA P +GLA P P A + A + S W P
Sbjct: 45 VWAAAAAAGGAGGPGSGLAPLPGLPPSAAAHGAALLSHWDP 85
>BC139832-1|AAI39833.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 329 SSRTEQYY--YRNDKPSVG*N*PVSRRSNPAHVPF*WVNNPTLGEFCFAMIGRADIEGSK 502
++ TE Y ++NDK + VS RSN W NN G C + EG
Sbjct: 275 ATTTETYMGEWKNDKRN---GFGVSERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKY 331
Query: 503 SNSL*TLGCHKPVIPV 550
N++ G K +IP+
Sbjct: 332 KNNILVRGIRKQLIPI 347
>BC114464-1|AAI14465.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 329 SSRTEQYY--YRNDKPSVG*N*PVSRRSNPAHVPF*WVNNPTLGEFCFAMIGRADIEGSK 502
++ TE Y ++NDK + VS RSN W NN G C + EG
Sbjct: 275 ATTTETYMGEWKNDKRN---GFGVSERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKY 331
Query: 503 SNSL*TLGCHKPVIPV 550
N++ G K +IP+
Sbjct: 332 KNNILVRGIRKQLIPI 347
>BC113856-1|AAI13857.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 329 SSRTEQYY--YRNDKPSVG*N*PVSRRSNPAHVPF*WVNNPTLGEFCFAMIGRADIEGSK 502
++ TE Y ++NDK + VS RSN W NN G C + EG
Sbjct: 275 ATTTETYMGEWKNDKRN---GFGVSERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKY 331
Query: 503 SNSL*TLGCHKPVIPV 550
N++ G K +IP+
Sbjct: 332 KNNILVRGIRKQLIPI 347
>BC098299-1|AAH98299.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 329 SSRTEQYY--YRNDKPSVG*N*PVSRRSNPAHVPF*WVNNPTLGEFCFAMIGRADIEGSK 502
++ TE Y ++NDK + VS RSN W NN G C + EG
Sbjct: 275 ATTTETYMGEWKNDKRN---GFGVSERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKY 331
Query: 503 SNSL*TLGCHKPVIPV 550
N++ G K +IP+
Sbjct: 332 KNNILVRGIRKQLIPI 347
>BC049372-1|AAH49372.1| 556|Homo sapiens JPH1 protein protein.
Length = 556
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 329 SSRTEQYY--YRNDKPSVG*N*PVSRRSNPAHVPF*WVNNPTLGEFCFAMIGRADIEGSK 502
++ TE Y ++NDK + VS RSN W NN G C + EG
Sbjct: 170 ATTTETYMGEWKNDKRN---GFGVSERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKY 226
Query: 503 SNSL*TLGCHKPVIPV 550
N++ G K +IP+
Sbjct: 227 KNNILVRGIRKQLIPI 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,047,213
Number of Sequences: 237096
Number of extensions: 2797199
Number of successful extensions: 6092
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6092
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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