Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0186
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.1  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   2.5  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   3.3  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      24   3.3  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   3.3  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   3.3  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   7.5  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.5  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   7.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   10.0 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   10.0 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   10.0 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   10.0 
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   10.0 

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 75  NSSRTSRRRLQATL 34
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 384 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 289
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 336 LALRTGACRVWTGSGCGRCRVWSM 407
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = -1

Query: 388 RPHPLPVQTRHAPVLRANPYSEV-----TDPICRLPLPTLFYRLEALHLGTC-CGY 239
           RPH  P Q   AP++  +  + V     T+P C        YR  +  +G C C Y
Sbjct: 38  RPHIQPFQMASAPLVAQSRSAMVQTLTCTNPTCSAQCRGRGYRRGSCTIGRCFCSY 93


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 400 QTRHRPHPLPVQTRHAPVLRANPYSEVT 317
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 400 QTRHRPHPLPVQTRHAPVLRANPYSEVT 317
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 205 PSPEFSRSAESIRTPPQMRCSSRSEPY 125
           P P  + + E    PP++ C+   E Y
Sbjct: 39  PEPSTTEATEEESPPPKIECTDPREVY 65


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 137 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 18
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 137 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 18
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 113 RIPWNSNAQAEKKTLPGPLG 54
           +IPW+ NA+A  K   G  G
Sbjct: 317 QIPWDRNAEALAKWASGQTG 336


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -1

Query: 352 PVLRANPYSEVTDPICRLPLPTLFYR 275
           P L     S +  P CRLP P L  R
Sbjct: 89  PELVTRSLSNLELPSCRLPCPNLIPR 114


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 374 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 472
           K +RPV    DV  +C   ++S LI   LKN I
Sbjct: 41  KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 73


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 374 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 472
           K +RPV    DV  +C   ++S LI   LKN I
Sbjct: 41  KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 73


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 314 IRNFGIRIGSEDRGVSGLDGKRMRPVPG 397
           I N  I      R VSGLD  R  P PG
Sbjct: 10  IGNLFIEPNRYRRIVSGLDSTRGSPAPG 37


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,232
Number of Sequences: 2352
Number of extensions: 14523
Number of successful extensions: 40
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)