Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0186
(601 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g76965.1 68414.m08961 glycine-rich protein 29 1.8
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 29 2.4
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 29 2.4
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 3.1
At5g42370.1 68418.m05159 expressed protein 29 3.1
At2g19150.1 68415.m02235 pectinesterase family protein contains ... 29 3.1
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 4.1
At5g22390.1 68418.m02612 expressed protein 27 7.2
At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1... 27 7.2
At1g76110.1 68414.m08838 high mobility group (HMG1/2) family pro... 27 7.2
At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical... 27 7.2
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 27 9.5
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 27 9.5
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 27 9.5
At2g45560.1 68415.m05665 cytochrome P450 family protein 27 9.5
At2g05210.1 68415.m00549 expressed protein 27 9.5
At1g43950.1 68414.m05070 auxin-responsive factor, putative simil... 27 9.5
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 396 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 301
PG + FP KP+ P P +P+L + F D
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 462 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 286
LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 462 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 286
LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 183 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 49
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 122 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 12
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At2g19150.1 68415.m02235 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 339
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 153 ICGGVRILSADLENSGEGCTWRCRAGSYPYPQQV 254
I GG+ + ++ EGCT + R G YP P +V
Sbjct: 185 ISGGIDFIFGGAQSIFEGCTLKLRVGIYP-PNEV 217
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 178 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 80
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 57 ERSGKSFLFCLSVRVPWNPIEG 122
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 964
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 178 LRTLKIQVRDVRGDVAPVRTHIRSRSQGEEPLVDRIM*VREVGKLDP*LRNKD 336
++ LK ++DVRGD + S+ Q E + + + GKLDP + D
Sbjct: 214 IQVLKDAIKDVRGDQRVTDRNPESKYQALEKYGNDLTEMARRGKLDPVIGRDD 266
>At1g76110.1 68414.m08838 high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing
protein low similarity to high mobility group protein
[Plasmodium falciparum] GI:790198; contains Pfam
profiles PF00505: HMG (high mobility group) box,
PF01388: ARID/BRIGHT DNA binding domain
Length = 338
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/69 (28%), Positives = 26/69 (37%)
Frame = -1
Query: 286 LFYRLEALHLGTCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGF 107
L + E +HL T G P H +PS A TPP +R + P S F
Sbjct: 120 LLFHYEQVHLFTARGPLLHPIATFHANPSTS-KEMALVEYTPPSIRYHNTHPPSQGSSSF 178
Query: 106 HGTRTLRQK 80
T+ K
Sbjct: 179 TAIGTIEGK 187
>At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical to
DNA Helicase [Arabidopsis thaliana] GI:11121449
Length = 1188
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 220 HLHVHPSPEFSRSAESIRTPPQMRCSSRSE 131
H H +P+ S S S+RTPP R +SR E
Sbjct: 229 HYHSTSTPQPSVSNFSLRTPPVDRSASRLE 258
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 436 NSLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 311
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 436 NSLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 311
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 3 SLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 116
SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 47 SLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At2g45560.1 68415.m05665 cytochrome P450 family protein
Length = 512
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 367 GREADAAGAGSGRCSCVMFVLAS*YFNIMRPQKLYIFNMTLAKIVLRSD 513
GR+ + G+GR C LA ++M LY F+ L K VL D
Sbjct: 435 GRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSED 483
>At2g05210.1 68415.m00549 expressed protein
Length = 364
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 178 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPR 23
+S T C+ +E Y +GF T TLR+KR L S +F PR
Sbjct: 282 DSTATLEAFLCNKDAE-YFWGLGFQDTETLRKKRNWL--LGIRESSNFVAPR 330
>At1g43950.1 68414.m05070 auxin-responsive factor, putative similar
to auxin response factor 9 [Arabidopsis thaliana]
GI:4580575; contains Pfam profile PF02362: B3 DNA
binding domain; non-consensus TT donor splice site at
exon 5
Length = 222
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 460 QKLYIFNMTLAKIVLRSDWIRTRVLRPSADLPSRKSCR 573
+K+Y F ++V S L+P+ DLPS+ CR
Sbjct: 44 EKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCR 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,972,483
Number of Sequences: 28952
Number of extensions: 305667
Number of successful extensions: 895
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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