Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0185
(623 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0644 + 19181335-19184424 92 3e-19
05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520 85 6e-17
02_01_0623 - 4676847-4676879,4676953-4677115,4677467-4677620,467... 34 0.080
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 30 1.3
07_01_0794 - 6179424-6179714,6179797-6179844,6180189-6180248,618... 29 2.3
02_01_0228 + 1507314-1507566,1507645-1507913,1508010-1508213,150... 29 2.3
10_06_0018 - 9674771-9674995,9675079-9675126,9675471-9675530,967... 29 4.0
09_04_0479 - 17948043-17949037,17949554-17949715,17949809-179502... 29 4.0
08_02_0431 + 17053928-17054189,17054296-17054564,17054661-170548... 29 4.0
12_01_0644 - 5454823-5455710 28 5.2
01_01_0124 - 1145105-1145320,1145480-1145611,1146485-1146562,114... 28 5.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 6.9
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342... 27 9.2
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 27 9.2
02_05_0743 + 31425827-31425888,31426733-31426759,31426840-314269... 27 9.2
>09_04_0644 + 19181335-19184424
Length = 1029
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/64 (65%), Positives = 44/64 (68%)
Frame = +3
Query: 246 LAFGHTFSLSKCEFACRYYRLKGRMVLFPFGFHCTGMPIKACADKLKREMAVYGCPPVFP 425
L GH FSLSK EF Y RL+G VL PF FHCTGMPIKA ADKL RE YG PP FP
Sbjct: 62 LHLGHAFSLSKLEFGAAYQRLRGSNVLLPFAFHCTGMPIKASADKLSREAQQYGYPPAFP 121
Query: 426 EDEE 437
E E+
Sbjct: 122 EVED 125
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 EYLQEIEKKVQERWESQKIFEVEAPDDGKSH-EKFLCTFPYPYMNGRLHL 255
+ L +I+ Q+ WE K+FE E + EKF FPYPYMNG LHL
Sbjct: 15 DILLKIQSDAQKWWEESKVFEAEPGNKPPGPGEKFFGNFPYPYMNGLLHL 64
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 512 GGSKYQWQIMKSIGVPEEEIKEFANESYWLEYFPPRA 622
G K+QW+IM+ G+ +EEI +F + +WL YFPP A
Sbjct: 160 GMQKFQWEIMRGFGLSDEEIAKFQDPYHWLTYFPPLA 196
>05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520
Length = 841
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = +3
Query: 246 LAFGHTFSLSKCEFACRYYRLKGRMVLFPFGFHCTGMPIKACADKLKREMAVYGCPPVFP 425
L GH F+LSK EFA Y+RL G VL PF FHCTGMPIK ADKL +E+ YG PPV P
Sbjct: 99 LHLGHAFTLSKLEFAAAYHRLHGSNVLLPFAFHCTGMPIKPSADKLGKEIQQYGNPPVLP 158
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 EYLQEIEKKVQERWESQKIFEVEAPDDGKSH-EKFLCTFPYPYMNGRLHL 255
+ L +I+ +VQ+ WE K+FE +A D S EKF F YPYMNG LHL
Sbjct: 52 DLLLKIQSEVQKCWEENKVFEAKAGDTPPSPGEKFFGNFTYPYMNGMLHL 101
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +2
Query: 512 GGSKYQWQIMKSIGVPEEEIKEFANESYWLEYFPPRA 622
G K QW+IM+S G+ + EI EF N +WL YFPP A
Sbjct: 197 GSYKSQWEIMRSFGIADGEIVEFQNLHHWLSYFPPLA 233
>02_01_0623 -
4676847-4676879,4676953-4677115,4677467-4677620,
4678413-4678554,4678641-4678706,4679389-4679922
Length = 363
Score = 34.3 bits (75), Expect = 0.080
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 252 FGHTFSLSKCEFACRYYRLKGRMVLFPFGFHCTGMPIKACADKLKR 389
+GH + S + R++ ++GR V FG+ C G+P++ D+ R
Sbjct: 57 YGHLLAGSIKDAVARHHAMRGRHVARRFGWDCHGVPVERAVDEALR 102
>06_03_0921 +
25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 252 FGHTFSLSKCEFACRYYRLKGRMVLFPFGFHCTGMPIKACADK 380
+GH + + + R+ ++GR V FG+ C G+P++ DK
Sbjct: 57 YGHILAGTIKDVVTRHQSMRGRHVSRRFGWDCHGLPVEFEIDK 99
>07_01_0794 -
6179424-6179714,6179797-6179844,6180189-6180248,
6180411-6180476,6180562-6180624,6180703-6180750,
6180868-6180933,6181031-6181096,6181230-6181295,
6181510-6181575,6181663-6181746,6181839-6181907,
6181998-6182342,6182426-6182521,6182615-6182707,
6182817-6183020,6183117-6183385,6183492-6183753
Length = 753
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 328 NSTILPFNR*YLQANSHLDRENV*PNASVHSCMDMEKYTKTSHVISH 188
NST+ + LQ H+++EN+ N+ H+ D +K T H +H
Sbjct: 575 NSTVKVYGDGPLQEICHVEQENIVMNSQSHA-QDEDKTPPTKHATAH 620
>02_01_0228 +
1507314-1507566,1507645-1507913,1508010-1508213,
1508323-1508415,1508509-1508604,1508688-1509032,
1509123-1509191,1509284-1509367,1509455-1509520,
1509735-1509800,1509934-1509999,1510097-1510162,
1510280-1510327,1510406-1510468,1510554-1510619,
1510782-1510841,1511185-1511232,1511315-1511605
Length = 750
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 328 NSTILPFNR*YLQANSHLDRENV*PNASVHSCMDMEKYTKTSHVISH 188
NST+ + LQ H+++EN+ N+ H+ D +K T H +H
Sbjct: 572 NSTVKVYGDGPLQEICHVEQENIVMNSQSHA-QDEDKTPPTKHATAH 617
>10_06_0018 -
9674771-9674995,9675079-9675126,9675471-9675530,
9675693-9675758,9675844-9675906,9675985-9676032,
9676150-9676215,9676493-9676558,9676660-9676725,
9676822-9676887,9676975-9677058,9677310-9677654,
9677738-9677833,9678129-9678332,9678434-9678726,
9678833-9678958,9679217-9679226
Length = 643
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 328 NSTILPFNR*YLQANSHLDRENV*PNASVHSCMDMEKYTKTSHVISH 188
NST+ + LQ H+++EN+ N+ H D +K T H +H
Sbjct: 487 NSTVKVYGDGPLQEICHVEQENIVMNSQSH-VQDEDKTPPTKHATAH 532
>09_04_0479 -
17948043-17949037,17949554-17949715,17949809-17950262,
17952895-17953326
Length = 680
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
Frame = -1
Query: 263 CMTKCKR---PFMYGYGK---VHKNF--SCDFPSSGASTSKIFW 156
C T+C PF +G G +H+ F CD + G S K FW
Sbjct: 30 CQTRCGDVDIPFPFGIGDHCAIHEGFRLECDNATKGTSNQKPFW 73
>08_02_0431 +
17053928-17054189,17054296-17054564,17054661-17054864,
17054974-17055066,17055160-17055255,17055339-17055683,
17055935-17056018,17056106-17056171,17056268-17056333,
17056436-17056501,17056635-17056700,17056798-17056863,
17056981-17057028,17057107-17057169,17057255-17057320,
17057483-17057542,17057888-17057935,17058019-17058255,
17058346-17058366
Length = 741
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 328 NSTILPFNR*YLQANSHLDRENV*PNASVHSCMDMEKYTKTSHVISH 188
NST+ + LQ H+++EN+ N+ H D +K T H +H
Sbjct: 574 NSTVKVYGDGPLQEICHVEQENIVMNSQSH-VQDEDKTPPTKHATAH 619
>12_01_0644 - 5454823-5455710
Length = 295
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 345 CTGMPIKACADKLKREMAVYGCPPVFPEDE-ELIVKD 452
CT P A A +A+ G PPVF E E +LI+ D
Sbjct: 176 CTSQPDLAAAAAASCRLALRGLPPVFHEVEWDLIMVD 212
>01_01_0124 -
1145105-1145320,1145480-1145611,1146485-1146562,
1147022-1147199,1147269-1147441,1147531-1147632,
1147717-1147794,1148178-1148259,1148343-1148405,
1150196-1150275,1150529-1150723,1150812-1151073,
1151566-1151720,1151799-1151865,1151956-1152179,
1152322-1152451,1153228-1153284,1153396-1153527,
1153758-1154086
Length = 910
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 246 LAFGHTFSLSKCEFACRYYRLKGRMVLFPFGFHCTGMP 359
L GH + + R+ R++G VL P G+ G+P
Sbjct: 114 LHVGHPLGYTATDILSRFKRMQGFNVLHPMGWDAFGLP 151
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 411 PPVFPEDEELIVKDEDIIP 467
PP+ PEDEEL+ DE + P
Sbjct: 344 PPMAPEDEELLRDDEVLTP 362
>07_01_0453 +
3420727-3420800,3421666-3421792,3422348-3422431,
3422550-3422644,3423063-3423154,3423326-3423379,
3424221-3424273,3424472-3424539,3424777-3424852,
3425159-3425242,3425793-3425941,3426375-3426492,
3426583-3426699,3426950-3427170,3427503-3427536,
3427585-3427685,3427832-3427943,3428379-3428504,
3428579-3428716,3428808-3428858,3428938-3429050,
3430253-3430318,3430582-3430729,3430826-3430930,
3431017-3431118,3431495-3431567,3431647-3431813,
3431906-3432028
Length = 956
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 243 TLAFGHTFSLSKCEFACRYYRLKGRMVLFPFGFHCTGMPIKACADKL 383
+L GH ++ + RY+R+KGR L+ G G+ + +K+
Sbjct: 55 SLHMGHAMFVTLEDIMVRYFRMKGRPALWLPGTDHAGIATQLVVEKM 101
>04_03_0985 - 21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 309 KGRMVLFPFGFHCTGMPIKACADKLKREMAVYGC 410
+G L P G+H +P+ K+ A++GC
Sbjct: 1088 EGHEELSPLGYHLAKLPVDVLIGKMMLYGAIFGC 1121
>02_05_0743 +
31425827-31425888,31426733-31426759,31426840-31426962,
31427252-31427492,31427655-31427780
Length = 192
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 208 FLCTFPYPYMNGRLHLVIHFLYPNV 282
F C PY NG H+ HF+ P V
Sbjct: 82 FNCWLVLPYFNGAAHVYEHFVRPMV 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,307,536
Number of Sequences: 37544
Number of extensions: 337178
Number of successful extensions: 984
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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