Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0185
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745227-1|AAU93494.1|   99|Anopheles gambiae cytochrome P450 pr...    25   2.6  
AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding pr...    24   3.4  
AY146724-1|AAO12084.1|  151|Anopheles gambiae odorant-binding pr...    24   4.5  
AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding pr...    24   4.5  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   6.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.0  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   7.9  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   7.9  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   7.9  

>AY745227-1|AAU93494.1|   99|Anopheles gambiae cytochrome P450
           protein.
          Length = 99

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 244 RLHLVIHFLYPNVSLPAGTTG*KVE 318
           RL+ V+ F+    +LP G+TG K+E
Sbjct: 7   RLYPVLAFIERQCTLPEGSTGYKLE 31


>AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP6 protein.
          Length = 155

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 378 KLKREMAVYGCPPVFPEDEE 437
           K+  EMA Y    +FP+D+E
Sbjct: 58  KISEEMANYPSQGIFPDDQE 77


>AY146724-1|AAO12084.1|  151|Anopheles gambiae odorant-binding
           protein AgamOBP18 protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 378 KLKREMAVYGCPPVFPEDEE 437
           K+  EMA Y    +FP+D+E
Sbjct: 54  KISEEMANYPSQGIFPDDKE 73


>AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding
           protein protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 378 KLKREMAVYGCPPVFPEDEE 437
           K+  EMA Y    +FP+D+E
Sbjct: 58  KISEEMANYPSQGIFPDDKE 77


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 52  LLNIYSLKMALDRKGTFKVEYLQEIE 129
           +LN + L +   +KG FKV+  +E E
Sbjct: 866 MLNYFLLNLTGPKKGNFKVKDKREFE 891


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 121 EIEKKVQERWESQKIFEVEAPDDGKS 198
           E+EKK+QE  ES +   V+  +  K+
Sbjct: 429 ELEKKIQEHTESFEQLRVQIDEHNKN 454


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 584 WQTL*SPLQEHQYSS*FATGTLNHQFGYGF 495
           W+ L  PLQ+  Y S  A+G +     Y F
Sbjct: 137 WKAL-EPLQKEAYRSTLASGRIERAVFYSF 165


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 415 GGQPYTAISRFSLSAQALIGIPVQWNPN 332
           GG P   +SR   SA A  G+P  WN N
Sbjct: 158 GGSP---VSRAG-SAAAATGVPGSWNTN 181


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 415 GGQPYTAISRFSLSAQALIGIPVQWNPN 332
           GG P   +SR   SA A  G+P  WN N
Sbjct: 158 GGSP---VSRAG-SAAAAAGVPGSWNTN 181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,892
Number of Sequences: 2352
Number of extensions: 14518
Number of successful extensions: 111
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)