Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0184
(693 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 26 0.25
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 2.4
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 7.2
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 7.2
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 7.2
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 21 9.6
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 21 9.6
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 9.6
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 9.6
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 26.2 bits (55), Expect = 0.25
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 543 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFL 665
FLL L +F + +F +Y+ ++ + F + L+FY + +
Sbjct: 195 FLLCLDYFTLHLLFLPC--IYYFYSAFIIFTIHLLFYCVLI 233
Score = 25.8 bits (54), Expect = 0.34
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 543 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLV--FYTIFLYFCFCSAFL 692
F + L F+ + I Y+ + ++ + LV +Y +++ FC AF+
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFI 273
Score = 23.4 bits (48), Expect = 1.8
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 522 TVGFNYPFLLFLTFFAIPFIFNQ-T*IVYFTWNVYRTFFVFLVFYTIFLYFCFCS 683
T F Y F++ L + + F T + F +Y +FV +F+ + +Y+ +C+
Sbjct: 100 TYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIY--YFVVPLFFLLCIYYFYCA 152
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 397 STFVLKPNKNVPQK-NRNGGNSFPRSK 320
+T +++ N+NVPQK NG FP S+
Sbjct: 735 ATSLVESNRNVPQKCIFNGQAYFPGSR 761
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 531 FNYPFLLFLTFFAI 572
F +PFLL +TF ++
Sbjct: 199 FGWPFLLLITFTSL 212
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 164 MLCINLVHHFIELVKASYNLE*EL 235
+LC ++ H EL+ A Y+L+ EL
Sbjct: 251 LLCDSVAHTAGELLGAVYSLDLEL 274
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 531 FNYPFLLFLTFFAI 572
F +PFLL +TF ++
Sbjct: 199 FGWPFLLLITFTSL 212
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 164 MLCINLVHHFIELVKASYNLE*EL 235
+LC ++ H EL+ A Y+L+ EL
Sbjct: 251 LLCDSVAHTAGELLGAVYSLDLEL 274
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 531 FNYPFLLFLTFFAI 572
F +PFLL +TF ++
Sbjct: 519 FGWPFLLLITFTSL 532
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 164 MLCINLVHHFIELVKASYNLE*EL 235
+LC ++ H EL+ A Y+L+ EL
Sbjct: 571 LLCDSVAHTAGELLGAVYSLDLEL 594
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 622 YTFHVKYTIHV*LKIKGIAKNVRKSKN 542
Y + +YT+ + I I KN R +KN
Sbjct: 15 YVYAEEYTVPQNIDIDEILKNDRLTKN 41
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 21.0 bits (42), Expect = 9.6
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Frame = +3
Query: 546 LLFLTFFAIPFIFNQT*I--VYFTWNVYRTFF-----VFLVFYTIFLYFCFCSAFL 692
L +L F I ++ T VY+ Y F+ F+ Y FLY CF S L
Sbjct: 99 LYYLLLFVINVLYVLTLCYAVYYWRQQYEDFWHRYTLSFIENYCQFLYNCFHSTLL 154
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 620 YVPREVYDSRL 588
YVPREVY+ +
Sbjct: 355 YVPREVYNKEI 365
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 633 FVFLVFYTIFLYFCFC 680
F F+ TI LYF C
Sbjct: 449 FTFITLLTIGLYFQLC 464
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,044
Number of Sequences: 336
Number of extensions: 2684
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -