Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0183
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.17 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 12/50 (24%), Positives = 26/50 (52%)
 Frame = -3

Query: 193 FLTVGFNYPFLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFL 44
           F+    +  FLL L +F +  +F     +Y+ ++ +  F + L+FY + +
Sbjct: 186 FIFFNMHLLFLLCLDYFTLHLLFLPC--IYYFYSAFIIFTIHLLFYCVLI 233



 Score = 25.8 bits (54), Expect = 0.40
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 166 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLV--FYTIFLYFCFCSAFL 17
           F + L F+ +  I       Y+ + ++    + LV  +Y  +++  FC AF+
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFI 273



 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 187 TVGFNYPFLLFLTFFAIPFIFNQ-T*IVYFTWNVYRTFFVFLVFYTIFLYFCFCS 26
           T  F Y F++ L  +   + F   T  + F   +Y  +FV  +F+ + +Y+ +C+
Sbjct: 100 TYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIY--YFVVPLFFLLCIYYFYCA 152


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 404 YLTLYSITPFGVSVFVILFT 463
           Y+T YSI+ F V + V++FT
Sbjct: 203 YVTWYSISVFMVPLVVLIFT 222


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +3

Query: 312 STFVLKPNKNVPQK-NRNGGNSFPRSK 389
           +T +++ N+NVPQK   NG   FP S+
Sbjct: 735 ATSLVESNRNVPQKCIFNGQAYFPGSR 761


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 178 FNYPFLLFLTFFAI 137
           F +PFLL +TF ++
Sbjct: 199 FGWPFLLLITFTSL 212


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 178 FNYPFLLFLTFFAI 137
           F +PFLL +TF ++
Sbjct: 199 FGWPFLLLITFTSL 212


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 178 FNYPFLLFLTFFAI 137
           F +PFLL +TF ++
Sbjct: 519 FGWPFLLLITFTSL 532


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,615
Number of Sequences: 336
Number of extensions: 3217
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)