Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0177
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    24   1.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   3.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.7  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 235 VDSFRAQWYLQPAKYDKDNLFYIYNREYSKAL 140
           +D+ R  W    AKYDKD    +Y ++Y   +
Sbjct: 94  IDNKRDWWNELEAKYDKDG---VYRQKYKDVI 122


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 416 WQTSSATVRTKQARKSA 366
           WQ+S +++R + ++KSA
Sbjct: 231 WQSSESSLRPRSSQKSA 247


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 533 MSLEPWSQS**AYSMQFILLFRISLFTTFVMTSLFF 640
           +S+EP   S   YS+ +ILLF + +  + V  + F+
Sbjct: 21  VSVEPTGFSPKGYSLLWILLFTLGVTISGVYRTDFY 56


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 247 GVNSVDSFRA 218
           GVNS DSF+A
Sbjct: 26  GVNSADSFKA 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,103
Number of Sequences: 336
Number of extensions: 2888
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)