BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0177
(648 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 25 2.7
AJ973475-1|CAJ01522.1| 127|Anopheles gambiae hypothetical prote... 24 3.6
AJ697728-1|CAG26921.1| 127|Anopheles gambiae putative sensory a... 24 3.6
AF487781-1|AAL96668.1| 533|Anopheles gambiae cytochrome P450 CY... 24 3.6
AJ973476-1|CAJ01523.1| 126|Anopheles gambiae hypothetical prote... 24 4.8
AJ697729-1|CAG26922.1| 126|Anopheles gambiae putative sensory a... 24 4.8
AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2 ... 23 6.3
DQ370044-1|ABD18605.1| 99|Anopheles gambiae putative salivary ... 23 8.3
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 8.3
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 23 8.3
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 24.6 bits (51), Expect = 2.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 222 LKLSTLLTPKACGRRSG 272
+K S+ TPK+ GRRSG
Sbjct: 1131 IKASSTNTPKSAGRRSG 1147
>AJ973475-1|CAJ01522.1| 127|Anopheles gambiae hypothetical protein
protein.
Length = 127
Score = 24.2 bits (50), Expect = 3.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 235 VDSFRAQWYLQPAKYDKDNLFYIYNREYSK 146
+++ + QW KYD +NL+ RE +K
Sbjct: 91 IENRKEQWDALQKKYDPENLYVEKYREEAK 120
>AJ697728-1|CAG26921.1| 127|Anopheles gambiae putative sensory
appendage protein SAP-2 protein.
Length = 127
Score = 24.2 bits (50), Expect = 3.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 235 VDSFRAQWYLQPAKYDKDNLFYIYNREYSK 146
+++ + QW KYD +NL+ RE +K
Sbjct: 91 IENRKEQWDALQKKYDPENLYVEKYREEAK 120
>AF487781-1|AAL96668.1| 533|Anopheles gambiae cytochrome P450
CYP9L1 protein protein.
Length = 533
Score = 24.2 bits (50), Expect = 3.6
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 253 AFGVNSVDSFRAQWYLQPAKYDKDNLFYIYNREYSKALTLSRTLETSG 110
AFGV+ V+SFR DKDN+F+ Y ++ S L L+ G
Sbjct: 193 AFGVH-VNSFR----------DKDNVFFRYGKDLSNFSRLKVALKIMG 229
>AJ973476-1|CAJ01523.1| 126|Anopheles gambiae hypothetical protein
protein.
Length = 126
Score = 23.8 bits (49), Expect = 4.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 235 VDSFRAQWYLQPAKYDKDNLFYIYNREYSK 146
+D+ + QW KYD +N++ RE +K
Sbjct: 91 IDNRKDQWENLQKKYDPENIYVNKYREDAK 120
>AJ697729-1|CAG26922.1| 126|Anopheles gambiae putative sensory
appendage protein SAP-3 protein.
Length = 126
Score = 23.8 bits (49), Expect = 4.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 235 VDSFRAQWYLQPAKYDKDNLFYIYNREYSK 146
+D+ + QW KYD +N++ RE +K
Sbjct: 91 IDNRKDQWENLQKKYDPENIYVNKYREDAK 120
>AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2
protein.
Length = 41
Score = 23.4 bits (48), Expect = 6.3
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 139 SKPCCIHGCRCRTNCLC 189
+ P C GC C + C C
Sbjct: 13 TSPNCGAGCGCESRCTC 29
>DQ370044-1|ABD18605.1| 99|Anopheles gambiae putative salivary
secreted peptide withTIL domain protein.
Length = 99
Score = 23.0 bits (47), Expect = 8.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 373 FRACFVLTVAEEVCHRCREHHYSASKRDRRACT 471
F A V V E C E +YS + RR CT
Sbjct: 12 FVALMVTFVYSEDCTVENEEYYSCASPCRRNCT 44
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.0 bits (47), Expect = 8.3
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = -3
Query: 637 EERSHHKCSEQTDT----KQQDELHGVRLSTLA 551
EE+ H +C++Q++T KQ ++ S LA
Sbjct: 484 EEKHHERCAKQSETTRIEKQLEQFESAPRSKLA 516
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.0 bits (47), Expect = 8.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 298 LVTLSVQDLEVDLVVLPQSNELPAD 372
LV +++L V LPQ+NE AD
Sbjct: 814 LVDAHLEELRVRFECLPQANESVAD 838
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,581
Number of Sequences: 2352
Number of extensions: 13089
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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