Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0174
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.6  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.6  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   8.7  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.7  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   8.7  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 333 ISQHGKDQARDDALETGGLDLIIAPGVAFSRSGDRLGHGGGY 458
           +S+ G+++AR   + T  L   + PGVA +  GD +G    Y
Sbjct: 353 VSRFGEEKAR--MITTMSL---LLPGVAVNYYGDEIGMSDTY 389


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 214 LEEQCLSHFRCSCREQYDLM 155
           L E C  H RC  R   D+M
Sbjct: 475 LPEPCRCHARCIARLALDMM 494


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 622 HEEIAPKECSECQRFF 669
           + E  P  C  CQ FF
Sbjct: 186 YSETGPSHCVVCQNFF 201


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 360 WLGLSHAEISRV*FLAWSAHHRSPSVTSSCA 268
           WLG  ++ ++ V +  WS   R   V   CA
Sbjct: 377 WLGWINSGMNPVIYACWSRDFRRAFVRILCA 407


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 333 ISQHGKDQARDDALETGGLDLIIAPGVAFSRSGDRLGHGGGY 458
           +S+ G+++AR   + T  L   + PGVA +  GD +G    Y
Sbjct: 353 VSRFGEEKAR--MITTMSL---LLPGVAVNYYGDEIGMSDTY 389


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 214 LEEQCLSHFRCSCREQYDLM 155
           L E C  H RC  R   D+M
Sbjct: 475 LPEPCRCHARCIARLALDMM 494


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
          preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 32 ILPKPCYVTKLPLKSPP 82
          ++P+P Y+  +P + PP
Sbjct: 47 LVPEPRYIIDVPPRCPP 63


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 89  MKRKKDNLKLFMKRLSTTHG 148
           M++   NLK ++K   T HG
Sbjct: 48  MEQDDQNLKCYLKCFMTKHG 67


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 32 ILPKPCYVTKLPLKSPP 82
          ++P+P Y+  +P + PP
Sbjct: 47 LVPEPRYIIDVPPRCPP 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,664
Number of Sequences: 438
Number of extensions: 5003
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)