Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0172
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.3  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   5.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.5  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   7.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.9  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 244 NNNSTIGF--NVETVEYKNISFTVWDVGGQDKIRPL 345
           +N S +G    +E +  KNI  TV + G   K++PL
Sbjct: 529 SNTSLLGAANQLEELNLKNIDLTVLESGAFCKMQPL 564


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 250 CCYNFT*FEFVQNCGFTSCIQTNHQYSHFLFAKRPLNKFAN 128
           C   +  F+ +Q  G     QTN   + F+ +  PLN  AN
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQTNIAIATFIQSLAPLNSAAN 303


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 211 CGFTSCIQTNHQYSHFLFAKRP 146
           CG+ S +++NH+   F+    P
Sbjct: 39  CGYHSPLESNHKLVTFILKNPP 60


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 689 FVCELAHIRLAVGVLEL 639
           F+C+LA   LAVG++ +
Sbjct: 84  FICQLAIADLAVGLISV 100


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 78  ELEKKRNTNEFLTIR 34
           ELEK+ +TN +LT R
Sbjct: 237 ELEKEFHTNHYLTRR 251


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
          protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 78 ELEKKRNTNEFLTIR 34
          ELEK+ +TN +LT R
Sbjct: 19 ELEKEFHTNHYLTRR 33


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 244 NNNSTIGFNVETVEYKNISFTVW 312
           N N  +G ++ ++  +  SF VW
Sbjct: 212 NENLKMGLDIASITAQASSFVVW 234


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 244 NNNSTIGFNVETVEYKNISFTVW 312
           N N  +G ++ ++  +  SF VW
Sbjct: 212 NENLKMGLDIASITAQASSFVVW 234


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 148 PLNKFANIFPILNYYEY 98
           PL K+ NIF I  +Y++
Sbjct: 17  PLVKYLNIFFITPWYDF 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,071
Number of Sequences: 336
Number of extensions: 4122
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)