Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0168
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54422| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_45635| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_38332| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_38086| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_35571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_33894| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_18613| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_15467| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_5161| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_2693| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_46668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_45616| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_43837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_38154| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_29395| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_17833| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_10777| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
>SB_54422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_45635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_38332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_38086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_35571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_33894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_18613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_15467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_5161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_2693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_46668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_45616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_43837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_38154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_29395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_17833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_10777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 305 KNYLRDNSVIFFFSSNKRKVCDLDVGLR 222
K+Y DNSVI S VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,594,589
Number of Sequences: 59808
Number of extensions: 202838
Number of successful extensions: 257
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -