Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0167
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensit...    29   6.7  
AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p pro...    29   6.7  
AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA...    29   6.7  
M10017-1|AAA65478.1|  552|Drosophila melanogaster engrailed prot...    29   8.9  
AY069448-1|AAL39593.1|  552|Drosophila melanogaster LD16125p pro...    29   8.9  
AE013599-1321|AAM68711.1|  552|Drosophila melanogaster CG9015-PB...    29   8.9  
AE013599-1320|AAF58639.1|  552|Drosophila melanogaster CG9015-PA...    29   8.9  

>U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 622

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 364 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 260
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 364 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 260
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 364 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 260
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>M10017-1|AAA65478.1|  552|Drosophila melanogaster engrailed protein
           protein.
          Length = 552

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -2

Query: 334 APLPPNRVS--NETMKVVVFQRRSRETISTYATPLMSPYNARLESSSTGSSFPADSPKPV 161
           +P P +  S  + T  V      S    S+ A+ L S  ++RL +S  GS   A SP+P 
Sbjct: 328 SPPPASNASTISSTSSVATSSSSSSSGCSSAASSLNSSPSSRLGAS--GSGVNASSPQPQ 385

Query: 160 PLAVVSLDSR*GQWES 113
           P+   S  SR    ES
Sbjct: 386 PIPPPSAVSRDSGMES 401


>AY069448-1|AAL39593.1|  552|Drosophila melanogaster LD16125p
           protein.
          Length = 552

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -2

Query: 334 APLPPNRVS--NETMKVVVFQRRSRETISTYATPLMSPYNARLESSSTGSSFPADSPKPV 161
           +P P +  S  + T  V      S    S+ A+ L S  ++RL +S  GS   A SP+P 
Sbjct: 328 SPPPASNASTISSTSSVATSSSSSSSGCSSAASSLNSSPSSRLGAS--GSGVNASSPQPQ 385

Query: 160 PLAVVSLDSR*GQWES 113
           P+   S  SR    ES
Sbjct: 386 PIPPPSAVSRDSGMES 401


>AE013599-1321|AAM68711.1|  552|Drosophila melanogaster CG9015-PB,
           isoform B protein.
          Length = 552

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -2

Query: 334 APLPPNRVS--NETMKVVVFQRRSRETISTYATPLMSPYNARLESSSTGSSFPADSPKPV 161
           +P P +  S  + T  V      S    S+ A+ L S  ++RL +S  GS   A SP+P 
Sbjct: 328 SPPPASNASTISSTSSVATSSSSSSSGCSSAASSLNSSPSSRLGAS--GSGVNASSPQPQ 385

Query: 160 PLAVVSLDSR*GQWES 113
           P+   S  SR    ES
Sbjct: 386 PIPPPSAVSRDSGMES 401


>AE013599-1320|AAF58639.1|  552|Drosophila melanogaster CG9015-PA,
           isoform A protein.
          Length = 552

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -2

Query: 334 APLPPNRVS--NETMKVVVFQRRSRETISTYATPLMSPYNARLESSSTGSSFPADSPKPV 161
           +P P +  S  + T  V      S    S+ A+ L S  ++RL +S  GS   A SP+P 
Sbjct: 328 SPPPASNASTISSTSSVATSSSSSSSGCSSAASSLNSSPSSRLGAS--GSGVNASSPQPQ 385

Query: 160 PLAVVSLDSR*GQWES 113
           P+   S  SR    ES
Sbjct: 386 PIPPPSAVSRDSGMES 401


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,381,875
Number of Sequences: 53049
Number of extensions: 765527
Number of successful extensions: 2638
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2636
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)