Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0162
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   2.6  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   4.5  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   4.5  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   6.0  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 589  VSLGWSDEIAWNQSGSLVYELVE 657
            +++  SDE+ WN+    V+E++E
Sbjct: 960  INIMCSDEVTWNRVAEYVHEVME 982


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = -3

Query: 640 PGNQIDSMRFHRSSPNSQSNFEWCSPQDPSS*FLGSNRSPDEGQT 506
           P N+        SS N  SN   CS    SS + G+   P    +
Sbjct: 175 PSNKQQQQLTSASSSNQLSNSSLCSASSGSSTYYGTMSEPSNASS 219


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 17/64 (26%), Positives = 24/64 (37%)
 Frame = -3

Query: 637 GNQIDSMRFHRSSPNSQSNFEWCSPQDPSS*FLGSNRSPDEGQTADEAKAELEKSGMAPE 458
           GN+ D+ RF  S P+        S  DP        R PD    +D    + E    +P 
Sbjct: 165 GNRADTNRFPPSRPDVTFASSVISRLDPRDDSARGWRVPDVATLSDHRYVQYEVGESSPP 224

Query: 457 AIDK 446
             D+
Sbjct: 225 TRDR 228


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 733 AFRSRSGILHGAHRVGRARDQRT 665
           AF+ R+ +L GAH VGR   + T
Sbjct: 689 AFQRRTLVLLGAHGVGRRHIKNT 711


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,438
Number of Sequences: 2352
Number of extensions: 18100
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)