Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0156
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IJJ6 Cluster: Putative uncharacterized protein; n=1; ...    39   0.11 
UniRef50_A0BR81 Cluster: Chromosome undetermined scaffold_122, w...    36   1.0  
UniRef50_O32200 Cluster: Protein liaG; n=1; Bacillus subtilis|Re...    35   1.8  
UniRef50_UPI00015977BA Cluster: YvqG; n=1; Bacillus amyloliquefa...    34   3.2  
UniRef50_A7DV65 Cluster: Transposase; n=7; Vibrionaceae|Rep: Tra...    33   7.3  
UniRef50_O33587 Cluster: AgrC; n=65; Staphylococcus|Rep: AgrC - ...    33   9.7  
UniRef50_O97333 Cluster: Putative uncharacterized protein MAL3P8...    33   9.7  

>UniRef50_Q8IJJ6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2111

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
 Frame = +1

Query: 262  HKIINYLGRYIPIYSIL-IHTLLTDN---LPSIPSIDKTKRVENKINF*KEKINAFKKKS 429
            HK IN+   +I ++ IL IHT + D+   L +I SID +K +  +I     +I       
Sbjct: 1409 HKFINF--HFIKLFDILNIHTYIIDDKHMLNNILSIDLSKDINIEIGLCVHRIIY----C 1462

Query: 430  L*YYYKMNLTSHIRVLKLK*FRKNYNSFNSFARFTI--LVRVPYDY--YFYTVKYR*YNH 597
            L Y +     SHI +L    F   Y  F+++  + +  + ++ Y    YFY ++Y   N+
Sbjct: 1463 LLYIFNFISLSHINILYNNYFYLKYFLFDAYIEYNLEYIYKLYYFIVNYFYLLQYMNKNN 1522

Query: 598  FSCIR*MLPT 627
            FS    + PT
Sbjct: 1523 FSVYIPLSPT 1532


>UniRef50_A0BR81 Cluster: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 265

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = +1

Query: 256 RLHKIINYLGRYI-PIYSILIHTLLTDNLPSIPSIDKTKRVENKINF*KEKINAFKKKS 429
           R + I+    R+  P  SIL    + + LP +P +DKT  +++ +   KE++N FKKK+
Sbjct: 143 RYYPILRKCKRFSRPRISILRSKPILEKLPILPQMDKTNTIDDSVAS-KEQVNYFKKKN 200


>UniRef50_O32200 Cluster: Protein liaG; n=1; Bacillus subtilis|Rep:
           Protein liaG - Bacillus subtilis
          Length = 240

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 445 KMNLTSHIRVLKLK*FRKNYNSFNSFARFTILVRVPYDY 561
           K+ +T + R L+L    K +   N F R T++VR+PYDY
Sbjct: 30  KLFVTENKRKLELTVKEKEFQFLNGFNRSTLIVRLPYDY 68


>UniRef50_UPI00015977BA Cluster: YvqG; n=1; Bacillus
           amyloliquefaciens FZB42|Rep: YvqG - Bacillus
           amyloliquefaciens FZB42
          Length = 289

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 445 KMNLTSHIRVLKLK*FRKNYNSFNSFARFTILVRVPYDYY 564
           KM + S  + L LK   K +   N F R  ++VR+PYDY+
Sbjct: 80  KMFVQSRGKTLNLKAKEKGFQFLNLFQRPLLIVRIPYDYH 119


>UniRef50_A7DV65 Cluster: Transposase; n=7; Vibrionaceae|Rep:
           Transposase - Vibrio vulnificus
          Length = 210

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +1

Query: 121 LICLLR*FYNYISLLLDLLNDSQHTRYF**FIENLY----FLFFGKYMLRLHKIINYLGR 288
           LI LLR  Y  ++LL    N  Q +R +  F+E  Y     + F +    L + +NYLGR
Sbjct: 111 LIGLLRRKYGELNLLTSSTNHIQDSRQWHFFLERQYQRYWNIHFAQKTQELKQTVNYLGR 170

Query: 289 YI 294
           Y+
Sbjct: 171 YL 172


>UniRef50_O33587 Cluster: AgrC; n=65; Staphylococcus|Rep: AgrC -
           Staphylococcus aureus
          Length = 437

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -1

Query: 706 ETYQQYTKTNSALNGVAIKFFKNCRFALVTFSVYMRNDYIIYI*QYRNSN 557
           ETY +YT    A+N    KF  +    L T S Y+R D +I +  Y N N
Sbjct: 230 ETYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMIGLRAYFNKN 279


>UniRef50_O97333 Cluster: Putative uncharacterized protein
           MAL3P8.17; n=2; Plasmodium|Rep: Putative uncharacterized
           protein MAL3P8.17 - Plasmodium falciparum (isolate 3D7)
          Length = 398

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +1

Query: 61  IVTFRPVIRYVRNIKRFL*KLICLLR*FYNYISLLLDLL 177
           IV F+ +I  ++N+KR   K IC L   YNYI  ++D+L
Sbjct: 137 IVLFKGIIYDMKNLKR---KNICCLLHMYNYIYFIIDIL 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,422,625
Number of Sequences: 1657284
Number of extensions: 10331778
Number of successful extensions: 18532
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18517
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)