Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0156
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S87759-1|AAB21784.1|  382|Homo sapiens protein phosphatase 2C al...    30   7.5  
BC063243-1|AAH63243.1|  382|Homo sapiens protein phosphatase 1A ...    30   7.5  
BC026691-1|AAH26691.1|  382|Homo sapiens protein phosphatase 1A ...    30   7.5  

>S87759-1|AAB21784.1|  382|Homo sapiens protein phosphatase 2C alpha
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 244 KYM-LRLHKIINYLGRYIPIYSILIHTLLTDNLPSIPSIDKTKRVENKINF*KEKINAFK 420
           KY+  R+ +II   G  +P    ++ TL ++N+PS+P   +     N I     ++N +K
Sbjct: 310 KYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPYK 369


>BC063243-1|AAH63243.1|  382|Homo sapiens protein phosphatase 1A
           (formerly 2C), magnesium-dependent, alpha isoform
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 244 KYM-LRLHKIINYLGRYIPIYSILIHTLLTDNLPSIPSIDKTKRVENKINF*KEKINAFK 420
           KY+  R+ +II   G  +P    ++ TL ++N+PS+P   +     N I     ++N +K
Sbjct: 310 KYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPYK 369


>BC026691-1|AAH26691.1|  382|Homo sapiens protein phosphatase 1A
           (formerly 2C), magnesium-dependent, alpha isoform
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 244 KYM-LRLHKIINYLGRYIPIYSILIHTLLTDNLPSIPSIDKTKRVENKINF*KEKINAFK 420
           KY+  R+ +II   G  +P    ++ TL ++N+PS+P   +     N I     ++N +K
Sbjct: 310 KYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPYK 369


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,032,485
Number of Sequences: 237096
Number of extensions: 1460980
Number of successful extensions: 9047
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9047
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)