Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0156
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    24   1.3  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   9.1  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   9.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   9.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   9.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.1  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 214 IENLYFLFFGKYMLRLHKIINYLGRYIPIYSIL 312
           + NL++LF G Y   L     +  ++ P+  IL
Sbjct: 34  LSNLFWLFVGTYFPSLIGANEHYSKFFPVSEIL 66


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 239 KNKKYKFSINY*KYLVCWESLSRSSSK 159
           + K YK   +Y KY   W+  SR  ++
Sbjct: 46  EQKSYKNENSYRKYRETWKERSRDRTE 72


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 239 KNKKYKFSINY*KYLVCWESLSRSSSK 159
           + K YK   +Y KY   W+  SR  ++
Sbjct: 46  EQKSYKNENSYRKYRETWKERSRDRTE 72


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 239 KNKKYKFSINY*KYLVCWESLSRSSSK 159
           + K YK   +Y KY   W+  SR  ++
Sbjct: 46  EQKSYKNENSYRKYRETWKERSRDRTE 72


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 239 KNKKYKFSINY*KYLVCWESLSRSSSK 159
           + K YK   +Y KY   W+  SR  ++
Sbjct: 46  EQKSYKNENSYRKYRETWKERSRDRTE 72


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 284 PK*FIILCNLNIYLPKNKKYKF 219
           P+   I+ + N+Y+ K+ +Y+F
Sbjct: 96  PRDVEIILSSNVYIDKSTEYRF 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,143
Number of Sequences: 438
Number of extensions: 3448
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)