Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0155
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   2.3  
DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    24   5.2  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           24   5.2  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           24   5.2  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   5.2  

>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 32  NFVYTPIKFIQEVAIIYKNNSS*VN 106
           NFV +  +F+  +A  Y NNS   N
Sbjct: 5   NFVMSSYQFVNSIASCYPNNSQNTN 29


>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 311 LIHSEIFTGKELKGKLLQICGDR 243
           ++H+ +  G+E  G + Q C DR
Sbjct: 178 VLHTNVNDGREFGGLIYQRCNDR 200


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 311 LIHSEIFTGKELKGKLLQICGDR 243
           ++H+ +  G+E  G + Q C DR
Sbjct: 178 VLHTNVNDGREFGGLIYQRCNDR 200


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 311 LIHSEIFTGKELKGKLLQICGDR 243
           ++H+ +  G+E  G + Q C DR
Sbjct: 178 VLHTNVNDGREFGGLIYQRCNDR 200


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 212 LDAHGRPGSVGTETFSRPSVLHGSAWRVPETRPS 111
           + A+GR  S+   +F  PS++  + WRV +  PS
Sbjct: 171 IGANGR-NSIVDVSFCSPSLVGDNNWRVCDETPS 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,700
Number of Sequences: 2352
Number of extensions: 18032
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)