BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVm0155 (694 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 26 0.30 EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 23 2.1 AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 2.8 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.4 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.4 AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 6.4 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.4 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.4 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 26.2 bits (55), Expect = 0.30 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = -3 Query: 521 QGIVTPRATTTLNVKSTKPLGQNATYLPI 435 Q +V TTT+N +T + + T +PI Sbjct: 828 QSVVVTNVTTTINTPTTSVISMSGTTVPI 856 >EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate carboxykinase protein. Length = 118 Score = 23.4 bits (48), Expect = 2.1 Identities = 7/16 (43%), Positives = 11/16 (68%) Frame = -2 Query: 300 GNLHWEGIEREATSDM 253 G + WEG+E+E D+ Sbjct: 100 GGIFWEGLEKEVGDDI 115 >AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter Am-EAAT protein. Length = 543 Score = 23.0 bits (47), Expect = 2.8 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +1 Query: 85 KQFKLSKLVEGLVSGTLQADP 147 K F L +V L+SG Q DP Sbjct: 108 KMFILPLIVSSLISGMAQLDP 128 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 21.8 bits (44), Expect = 6.4 Identities = 7/19 (36%), Positives = 10/19 (52%) Frame = -2 Query: 309 YPLGNLHWEGIEREATSDM 253 YP+ + WE RE D+ Sbjct: 545 YPIEEIKWERANRELPDDL 563 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 21.8 bits (44), Expect = 6.4 Identities = 7/19 (36%), Positives = 10/19 (52%) Frame = -2 Query: 309 YPLGNLHWEGIEREATSDM 253 YP+ + WE RE D+ Sbjct: 545 YPIEEIKWERANRELPDDL 563 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 21.8 bits (44), Expect = 6.4 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -3 Query: 227 GFGRHLDAHGRPG 189 G+GRHL H + G Sbjct: 209 GYGRHLPGHAQMG 221 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 21.4 bits (43), Expect = 8.4 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -1 Query: 244 GVPTLEDLG 218 GVPTLE+LG Sbjct: 209 GVPTLEELG 217 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.4 bits (43), Expect = 8.4 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = -2 Query: 459 PKRYLLADLVDWFYKLMRKDEKW--GGYIRYDMKYD 358 P YLL D + Y RK+ W G ++ ++ Y+ Sbjct: 977 PTEYLLEDSMKQQYGKRRKEPPWLEGVHVTPELIYE 1012 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 208,740 Number of Sequences: 438 Number of extensions: 4885 Number of successful extensions: 10 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21195810 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -