Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0152
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21397| Best HMM Match : Tropomodulin (HMM E-Value=0) 61 1e-09
SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13) 44 1e-04
SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_54669| Best HMM Match : Tropomodulin (HMM E-Value=0.09) 40 0.002
SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11) 40 0.003
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_23844| Best HMM Match : RRM_2 (HMM E-Value=4.8) 39 0.005
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 38 0.006
SB_55736| Best HMM Match : NACHT (HMM E-Value=3.2e-14) 38 0.008
SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 37 0.015
SB_6061| Best HMM Match : NACHT (HMM E-Value=0.00065) 37 0.015
SB_21072| Best HMM Match : DUF417 (HMM E-Value=1.3) 37 0.019
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_24157| Best HMM Match : Tropomodulin (HMM E-Value=0.49) 36 0.026
SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017) 36 0.026
SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_16347| Best HMM Match : LRR_1 (HMM E-Value=0.37) 36 0.045
SB_42306| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=1.4) 35 0.078
SB_41133| Best HMM Match : LRR_1 (HMM E-Value=2.2e-09) 35 0.078
SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044) 35 0.078
SB_41143| Best HMM Match : Tropomodulin (HMM E-Value=0.09) 34 0.14
SB_25556| Best HMM Match : rve (HMM E-Value=2.8e-17) 34 0.14
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_50400| Best HMM Match : Tropomodulin (HMM E-Value=0.17) 33 0.24
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_17682| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_12936| Best HMM Match : LRR_1 (HMM E-Value=0.00017) 32 0.42
SB_47455| Best HMM Match : NACHT (HMM E-Value=4.3e-05) 32 0.42
SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10) 32 0.55
SB_52802| Best HMM Match : Tropomodulin (HMM E-Value=0.11) 32 0.55
SB_59312| Best HMM Match : Tropomodulin (HMM E-Value=0.11) 31 0.73
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_34416| Best HMM Match : Peptidase_C1 (HMM E-Value=2e-09) 31 1.3
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 30 2.2
SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_3061| Best HMM Match : Tropomodulin (HMM E-Value=0.032) 29 3.9
SB_22701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_40326| Best HMM Match : PhoU (HMM E-Value=2.9) 29 5.1
SB_31810| Best HMM Match : Pkinase (HMM E-Value=0.17) 29 5.1
SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_27476| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 28 6.8
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_28804| Best HMM Match : DUF1556 (HMM E-Value=5.1) 28 9.0
>SB_21397| Best HMM Match : Tropomodulin (HMM E-Value=0)
Length = 373
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = +1
Query: 262 RVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADAL 441
+++ D LT LN NN K+++ E E++ +K ++ ++ L + N +TDR ADAL
Sbjct: 191 KLKNGDSSLTRLNLNNHKDVTPEILEEVAAEMKKSTTLKHLEMANTQMTDRIGRLFADAL 250
Query: 442 RHNTALRVLSVETNFISPPALV 507
+ N LR L++E+NF+S L+
Sbjct: 251 KKNKTLRSLNMESNFLSGEVLL 272
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -3
Query: 112 DEYEQALGTASQEEIIDLAAILGFHSMMIQKR 17
D+ L A++E++++LA +LG HSM+ ++
Sbjct: 110 DDLSDVLENATEEQLLELAGVLGIHSMLTSEQ 141
>SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13)
Length = 489
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +1
Query: 283 KLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALR 462
++ DL+WN + E L EALK N+ + VL+L N LTDR +A+ L NT L
Sbjct: 278 EMLDLSWNGFDDFGTED---LMEALKRNTSLIVLNLSNNRLTDRGILNIANGLNGNTTLE 334
Query: 463 VLSVETN 483
L++ N
Sbjct: 335 ELNLNRN 341
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ +V +++ L +L+ N NI E + AL N+ + L L GLTD+ A LAD
Sbjct: 155 MGKVLVSNKSLKELDLAN-NNIRKEGVSAISNALVENTVIRRLDLSGNGLTDKDAKILAD 213
Query: 436 ALRHNTALRVLSVETN 483
A+ +N+ LR L++ N
Sbjct: 214 AIGNNSTLRYLNLSYN 229
>SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1191
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +1
Query: 307 NIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETN 483
N ISDE + L + LK+N+ ++VL+L + + D+ A A AD L +N+ + VL + N
Sbjct: 1107 NCNIISDEAAKALADGLKTNTSLKVLNLWSNKIGDKDASAFADMLSYNSVIEVLDLWPN 1165
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 337 EKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNF 486
+K+ LK N+ + L L + G+ ALAD + HN A+ +L + F
Sbjct: 833 QKILTILKQNTSLRCLRLHSSGILPDALLALADLIVHNNAIEILQLHIPF 882
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 337 EKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
E + E L N + L + ++D A ALAD L+ NT+L+VL++ +N I
Sbjct: 1089 EVIAEKLSKNGVLRELHINCNIISDEAAKALADGLKTNTSLKVLNLWSNKI 1139
>SB_54669| Best HMM Match : Tropomodulin (HMM E-Value=0.09)
Length = 697
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
IA+V +N KL L+ N+ +I L EAL N+++ LS+ G+ D ALA
Sbjct: 520 IAKVIKNSCKLKYLSINHC-DIDVLGVRDLAEALSKNTNLGELSVACAGIDDEGMCALAQ 578
Query: 436 ALRHNTALRVLSVETNFIS 492
++ N +L+VL++ N IS
Sbjct: 579 SVAENRSLQVLTITYNNIS 597
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 343 LFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSV 474
LF++LK+NS + + + + L D A LA LR+NT+L + +
Sbjct: 411 LFKSLKNNSTLSAIHIDFISLGDACAKKLAKVLRNNTSLNAVYI 454
>SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11)
Length = 497
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +1
Query: 292 DLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLS 471
DL+WN+++ + + +A+ N+ + VL L G D A A+ +ALRHN+ L+ L
Sbjct: 253 DLSWNHLRM---KGAIAICKAMGENASIRVLDLSWNGFADDGAAAMGNALRHNSTLKELD 309
Query: 472 VETNFIS 492
+ N I+
Sbjct: 310 LSHNRIT 316
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSV 474
ISDE + L + LK+N+ ++VL+L N + D+ A A AD L +N+ + VL +
Sbjct: 1803 ISDEVAKALADGLKTNTSLKVLNLSN-EIGDKGASAFADMLSYNSVIEVLDL 1853
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 337 EKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSV 474
E + E L N + L + ++D A ALAD L+ NT+L+VL++
Sbjct: 1781 EVIAEILSKNGVLRKLHIHCNIISDEVAKALADGLKTNTSLKVLNL 1826
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 328 EKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVE 477
E + + LK N+ + L L ++ + ALAD + HN A+ +L ++
Sbjct: 1484 EIIQTILTILKQNTSLRFLRLQSLDILPDALLALADLIVHNNAIEILQLD 1533
>SB_23844| Best HMM Match : RRM_2 (HMM E-Value=4.8)
Length = 190
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
++A+V N+ L ++ K + D + EALK N+ V L + +T AL
Sbjct: 59 ELAKVLVNNTSLNIVHIGG-KYLGDAGVASIAEALKVNTTVRKLGIKGNNMTPEAGRALG 117
Query: 433 DALRHNTALRVLSV 474
+ LRHNT + +LS+
Sbjct: 118 EMLRHNTTITLLSL 131
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 343 LFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
LFE+LK+NS + + + L D A LA L +NT+L ++ + ++
Sbjct: 32 LFESLKNNSTLSTIGIHFYSLGDACASELAKVLVNNTSLNIVHIGGKYL 80
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = +1
Query: 283 KLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALR 462
++ DL+WN +DE + E+LK N+ + L L +T + A ALA+ L+ N L+
Sbjct: 446 QVLDLSWNGF---ADEGAHAVGESLKDNNTLLELDLSYNRITCKGALALAEGLKINNTLK 502
Query: 463 VLSVETNFI 489
VL + N I
Sbjct: 503 VLKIGMNMI 511
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 343 LFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETN 483
L E LK N+ ++VL + + ++ A AL DA+R+N + V N
Sbjct: 491 LAEGLKINNTLKVLKIGMNMIQNKGANALLDAMRNNAECAMEKVYLN 537
>SB_55736| Best HMM Match : NACHT (HMM E-Value=3.2e-14)
Length = 696
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
K+A + ++ LT++ +I + D + L ALK N+ V L++ + +T A+
Sbjct: 567 KLAEILSDNTSLTEVFIGSII-LGDASIKSLANALKVNTTVRTLAIRSGNMTSEAGRAIG 625
Query: 433 DALRHNTALRVL 468
+ LRHNT + L
Sbjct: 626 EMLRHNTTVTSL 637
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 325 DEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTAL 459
+ F L E+LK+N + + +++ D A LA+ L NT+L
Sbjct: 534 EANFGNLIESLKNNVTLSAIRIMSDAFEDSCAIKLAEILSDNTSL 578
>SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = +1
Query: 211 GIPNGPAQRHGPG*KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSL 390
G+P+ P G + + +N+ L+ ++ N ++ D + EAL N+ V L +
Sbjct: 684 GVPDRPEYEMGTS--LFKSLKNNSTLSAIHIN-FDSLGDAGVASIAEALMVNTTVRALGI 740
Query: 391 VNVGLTDRTAGALADALRHNTALRVLSV 474
+T AL + L+HNT + LS+
Sbjct: 741 SGKNMTPEAGRALGEMLKHNTTITCLSL 768
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 313 KNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
KN++ E L E LK N+ + LSL+ + D A +A L NT L + ++ + I
Sbjct: 743 KNMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLSQNTTLDKIQIKNSGI 801
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
+ D + EALK N+ V L + +T AL + LRHNT + +LS+ + I
Sbjct: 842 LGDAGVASIAEALKVNTTVRTLGIKGRNMTPEAGRALGEMLRHNTTITLLSLASGNI 898
>SB_6061| Best HMM Match : NACHT (HMM E-Value=0.00065)
Length = 879
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 313 KNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVE 477
KNI DE + + EAL +NS ++ L L + D A A+A+AL N+ L +++ E
Sbjct: 780 KNIGDEGAKAIAEALMTNSTLKELHLYESNIGDEGAIAIANALMTNSTLILMASE 834
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 307 NIKNISDEKFEKLFEALKSNSHVEVLSL-VNVGLTDRTAGALADALRHNTALRVLSVETN 483
N+K SDE KL E ++ S +E L+L ++ LT A AL N +++ L + +
Sbjct: 586 NMKVTSDELLMKLAEVIEHRSLIEELNLKISRSLTHNAWSDFARALSANNSIKALHLSSE 645
Query: 484 FISP 495
+P
Sbjct: 646 EYNP 649
>SB_21072| Best HMM Match : DUF417 (HMM E-Value=1.3)
Length = 248
Score = 36.7 bits (81), Expect = 0.019
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
++A V ++ L D+ + + + D + +ALK N+ V L ++ +T AL
Sbjct: 148 ELAEVLVDNTSLNDIYISG-EYLGDAGVASIAKALKVNTTVRALGIIGGNMTPEAGRALG 206
Query: 433 DALRHNTALRVLSV 474
+ L+HNT + LS+
Sbjct: 207 EMLKHNTTITCLSL 220
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 295 LNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSV 474
L WN+ ++ E + ++LK+NS + + + L D A LA+ L NT+L + +
Sbjct: 106 LRWNSDEH-EYEMGTSVVKSLKNNSTLSAIHIDFNSLGDACASELAEVLVDNTSLNDIYI 164
Query: 475 ETNFI 489
++
Sbjct: 165 SGEYL 169
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
++A V ++ L D+ + + D + +ALK N+ V L ++ +T AL
Sbjct: 1168 ELAEVLVDNTSLNDVYIGG-EYLGDAGVASIAKALKVNTTVRTLGIIGRKMTPEAGRALG 1226
Query: 433 DALRHNTALRVLSV 474
+ LRHNT + LS+
Sbjct: 1227 EMLRHNTTITCLSL 1240
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 343 LFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTAL 459
LF++LK+NS + + + + L D A LA+ L NT+L
Sbjct: 1141 LFKSLKNNSTLSAIHIDFISLGDACASELAEVLVDNTSL 1179
>SB_24157| Best HMM Match : Tropomodulin (HMM E-Value=0.49)
Length = 502
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
++A+V ++ L+D+ + + + D + +ALK N+ V L + +T AL
Sbjct: 321 ELAKVLEDSTSLSDVLISG-EYLGDAGVASIAKALKVNTTVRALGIKGDNMTPEAGRALG 379
Query: 433 DALRHNTALRVLSVETNFI 489
+ RHNT + LS+ + I
Sbjct: 380 EMFRHNTTITCLSLASGNI 398
>SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017)
Length = 1243
Score = 36.3 bits (80), Expect = 0.026
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLS 471
NI DE + AL +NS ++ L L + G+ A ALAD L +NT L+V S
Sbjct: 1169 NIGDEGAIAIANALMTNSTLKKLYLHDYGIRAVGAAALADMLYYNTELKVCS 1220
>SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 35.5 bits (78), Expect = 0.045
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 313 KNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSV 474
K + D + +ALK N+ V L + +T AL + LRHNT + +LS+
Sbjct: 547 KYLGDAGVASIAKALKVNTTVRKLGIKGRNMTPEAGRALGEMLRHNTTITLLSL 600
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 343 LFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
LF++LK+NS + + + L D A LA L NT+L V+ + ++
Sbjct: 501 LFKSLKNNSTLSTIDISVNSLGDACASELAKVLVDNTSLNVVYIGGKYL 549
>SB_16347| Best HMM Match : LRR_1 (HMM E-Value=0.37)
Length = 320
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
K+A + ++ LTD+ + + + ++L ALK N V L + +T A+
Sbjct: 16 KLAEILSDNTSLTDVRIKS-EILGGTGIKRLANALKVNKTVRTLGIDGGNMTSEAGRAIG 74
Query: 433 DALRHNTALRVL 468
+ LRHNT + L
Sbjct: 75 EMLRHNTTVTSL 86
>SB_42306| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=1.4)
Length = 444
Score = 34.7 bits (76), Expect = 0.078
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETN 483
N+SD+ ++L AL NS +E LS+ + D ALA+++ N L+VL + N
Sbjct: 295 NLSDQGTKELAIALSRNSCLEELSVACNDINDEGMCALAESVASNKTLQVLYISYN 350
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
K+A + ++ LTD+ ++ + L ALK N V L + + +T + A+
Sbjct: 171 KLAEILSDNTSLTDVRIDSTI-LGGTGVTSLANALKVNKTVRTLGIRSHNMTSEASRAIG 229
Query: 433 DALRHNTALRVL 468
+ LRHNT + L
Sbjct: 230 EMLRHNTTVTSL 241
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
I + L E+LK+N + + + + G D A LA+ L NT+L + +++ +
Sbjct: 136 IGEANVGNLIESLKNNVTLSAICIESTGFGDSCAIKLAEILSDNTSLTDVRIDSTIL 192
>SB_41133| Best HMM Match : LRR_1 (HMM E-Value=2.2e-09)
Length = 539
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETN 483
+IS+ +L +L N +EVL L GL + A+ +LR NT LRVL + N
Sbjct: 274 DISEVAGFRLGGSLAVNKGLEVLKLQWNGLRSKAGVAIGQSLRKNTTLRVLDLSNN 329
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 265 VQQNDQKLTDLNWNNIKN--ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADA 438
+ Q+ +K T L ++ N + D L E+L+ NS + L N L+ ++A
Sbjct: 311 IGQSLRKNTTLRVLDLSNNGLDDTVARSLGESLRVNSTLVELDFSNNRLSGLAFASIARG 370
Query: 439 LRHNTALRVLSVETN 483
L NT+LRVL N
Sbjct: 371 LERNTSLRVLRCGNN 385
>SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044)
Length = 899
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
NI DE + AL +NS ++ L+ G+ A ALAD L +NT L+V ++I
Sbjct: 824 NIGDEGAIAIANALMTNSTLKKLNFNTCGIRAVGAAALADMLYYNTELKVQYFYNSYI 881
>SB_41143| Best HMM Match : Tropomodulin (HMM E-Value=0.09)
Length = 771
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 313 KNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
KN++ E L E LK N+ + LSL+ + D A +A L NT L + ++ + I
Sbjct: 513 KNMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLSQNTTLDKIQIKNSGI 571
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSV 474
+ D + EAL N+ V L + +T AL + L+HNT + LS+
Sbjct: 487 LGDAGVASIAEALIVNTTVRALGISGKNMTPEAGRALGEMLKHNTTITCLSL 538
>SB_25556| Best HMM Match : rve (HMM E-Value=2.8e-17)
Length = 735
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFISPP 498
I+ + + + + +N H++ L + L+D+ + L++AL NTAL L + N I P
Sbjct: 420 INGKDMMEFCKGIATNPHLKSLIFHSNNLSDQGSRLLSEALASNTALETLDLSWNDIRPG 479
Query: 499 AL 504
A+
Sbjct: 480 AM 481
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETN 483
N+SD+ L EAL SN+ +E L L + LA LR N ++ L + N
Sbjct: 447 NLSDQGSRLLSEALASNTALETLDLSWNDIRPGAMATLAKGLRLNHTIQELDLSWN 502
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
K+A + ++ LTD+ + + L ALK N V L + +T A+
Sbjct: 2037 KLAEILSDNTSLTDVRIDRTI-LGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAIG 2095
Query: 433 DALRHNTALRVL 468
+ LRHNT + L
Sbjct: 2096 EMLRHNTTVTSL 2107
>SB_50400| Best HMM Match : Tropomodulin (HMM E-Value=0.17)
Length = 641
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
K+A + ++ LT + N+ K + L ALK N V L + +T A+
Sbjct: 344 KLAEILSDNTSLTAVRINS-KILGGTGVTSLANALKVNKTVRTLKIDGGNMTSEAGRAIG 402
Query: 433 DALRHNTALRVL 468
+ L+HNT + L
Sbjct: 403 EMLKHNTTVTSL 414
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
I + L E+LK+N + + + + G D A LA+ L NT+L + + + +
Sbjct: 309 IGEANVGNLIESLKNNVTLSSICIDSDGFGDSCAIKLAEILSDNTSLTAVRINSKIL 365
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
K+A + ++ LT + N+ K + L ALK N V L + +T A+
Sbjct: 860 KLAEILSDNTSLTAVRINS-KILGGTGVTSLANALKVNKTVRTLKIDGGNMTSEAGRAIG 918
Query: 433 DALRHNTALRVL 468
+ L+HNT + L
Sbjct: 919 EMLKHNTTVTSL 930
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
I + L E+LK+N + + + + G D A LA+ L NT+L + + + +
Sbjct: 825 IGEANVGNLIESLKNNVTLSSICIDSDGFGDSCAIKLAEILSDNTSLTAVRINSKIL 881
>SB_17682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETN 483
+SD L EALK + V+ L L G++ A L+ NT + VL + N
Sbjct: 158 VSDRGMSYLAEALKDDLWVKALDLQQCGVSTEGAMEFQPVLKFNTTITVLDLRLN 212
>SB_12936| Best HMM Match : LRR_1 (HMM E-Value=0.00017)
Length = 472
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
NI E + ALK+ S + LSL + + D+ A A+A AL+ N+ L L + N I
Sbjct: 274 NIEVEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASALKTNSTLENLDLRCNNI 331
>SB_47455| Best HMM Match : NACHT (HMM E-Value=4.3e-05)
Length = 899
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
NI E + ALK+ S + LSL + + D+ A A+A AL+ N+ L L + N I
Sbjct: 810 NIEVEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASALKTNSTLENLDLRCNNI 867
>SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10)
Length = 1037
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
++A+V + + L D+ + + D + EAL N+ V L + +T AL
Sbjct: 689 ELAKVLEVNTSLNDVFIGG-EYLGDAGVASIAEALIVNTTVRTLGIRGDNMTPEAGRALG 747
Query: 433 DALRHNTALRVLSV 474
+ RHNT + LS+
Sbjct: 748 EMFRHNTTITCLSL 761
>SB_52802| Best HMM Match : Tropomodulin (HMM E-Value=0.11)
Length = 768
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 325 DEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSV 474
D + EALK + V L + +T AL + LRHNT + LS+
Sbjct: 374 DAGVASIAEALKVKTTVRKLGIKGRNMTPEAGRALGEMLRHNTTITFLSL 423
>SB_59312| Best HMM Match : Tropomodulin (HMM E-Value=0.11)
Length = 561
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+A + D L L ++ + + + E L N ++ LSL + ++ ALA+
Sbjct: 79 LANALKQDYTLRILKLEGRESFDSDSVKAIAEMLSQNWKLQELSL-RLHCSEGVV-ALAN 136
Query: 436 ALRHNTALRVLSVE 477
AL+ NT LRVL +E
Sbjct: 137 ALKQNTTLRVLKLE 150
>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2532
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAG-ALA 432
+A V + LTD+ + + D + + EALK N+ + L+ +N G AG A
Sbjct: 2230 LAEVLSGNTTLTDIYIGG-EILGDAGVQYIAEALKFNTTIRTLA-INPGRVTPDAGQAFG 2287
Query: 433 DALRH-NTALRVLSVETN 483
+ LRH NT R+ S+ ++
Sbjct: 2288 EMLRHNNTITRLTSIHSH 2305
Score = 31.1 bits (67), Expect = 0.96
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 319 ISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRH-NTALRVLSVETN 483
+ D + + EALK N+ + L++ +T AL + LRH NT R+ S+ N
Sbjct: 938 LGDAGVQHIAEALKFNTTIRTLAINPRRVTPDAGQALGEMLRHNNTITRLTSIHGN 993
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTAL 459
NI D +++ + L N+ V L+LVN G+ ALA A+++ T L
Sbjct: 2307 NIVDLGAQRISDGLALNTKVTELTLVNAGIGPSGTRALAKAIQNVTLL 2354
>SB_34416| Best HMM Match : Peptidase_C1 (HMM E-Value=2e-09)
Length = 817
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 343 LFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFI 489
LF++LK+NS + + + L D A LA+ L NT+L + + ++
Sbjct: 746 LFKSLKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYL 794
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = -2
Query: 689 RRDPVPRVAVLEVQPETQQGRILFDELSYLHLDLV 585
R+D +P+VA+ + QP Q+ R+ F +++ + D+V
Sbjct: 432 RQDHIPQVAMWKSQPRGQKSRVAFADMALSNPDVV 466
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 325 DEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSV 474
D + EAL N+ V L + +T AL + L+HNT + LS+
Sbjct: 1295 DAGVASIAEALIVNTTVRALGIRGDNMTPEAGRALGEMLKHNTTITCLSL 1344
>SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026)
Length = 521
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
++A + +T + N I DE EKL ALK+ +++L+L + A +A
Sbjct: 161 ELAAAITTKEDVTSITLRNA-TIDDEAIEKLAAALKTTQSIKMLNLNVNKVGPEGAKHVA 219
Query: 433 DALRHNTALRVLSVETN 483
+ ++ +LR+L + N
Sbjct: 220 EVIKSAKSLRMLLLHGN 236
>SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1503
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 540 VEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRIR 719
+ + A NQR Q L I + ++L P + EY+D + RV + L R+IDR R
Sbjct: 453 IRDLDAHNQRLQQLDRDISLTQSKLHGIAPGRTMQAVTNEYNDRQDRVET-LNRHIDRRR 511
Query: 720 QQ 725
++
Sbjct: 512 RE 513
>SB_3061| Best HMM Match : Tropomodulin (HMM E-Value=0.032)
Length = 614
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+A + D L L ++ + + + E L N+ ++ LSL + ++ ALA+
Sbjct: 353 LANALKQDYTLRVLKLEGRESFDSDSVKAIAEMLPENTTLQDLSL-HFHCSEGVV-ALAN 410
Query: 436 ALRHNTALRVLSVE 477
AL+ N LRVL +E
Sbjct: 411 ALKQNCTLRVLKLE 424
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+A + + L L ++ + E++ E L N ++VLSL + ++ ALA+
Sbjct: 298 LAHALKQNYTLRVLKLEGRESFHSDSVEEIAEMLSQNWTLQVLSL-RLHCSEGVV-ALAN 355
Query: 436 ALRHNTALRVLSVE 477
AL+ + LRVL +E
Sbjct: 356 ALKQDYTLRVLKLE 369
>SB_22701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 220 WEYLGFSGFGDAVPSESDGLALVQKRRVILVLIHHRDEYEQALGTAS 80
W+ LG S A S+S + L+Q L+H + EQA TAS
Sbjct: 20 WDILGESLTELAKTSDSHAVLLLQPAVEAFFLVHGSERQEQAAATAS 66
>SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 343 LFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFIS 492
L +AL + S++EVL L +T A LAD+L T L LS+++N I+
Sbjct: 516 LAKALVNLSNLEVLHLAWNEITCEGAILLADSLSGLTRLEALSLKSNKIA 565
>SB_40326| Best HMM Match : PhoU (HMM E-Value=2.9)
Length = 672
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 355 LKSNSHVEVLSLVNVGL-TDRTAGALADALRHNTALRVL 468
LK N+ + L + ++G+ D+ ALAD + HN A+ +L
Sbjct: 310 LKQNTSLRYLRINSLGIYPDKALLALADLIVHNNAIEIL 348
>SB_31810| Best HMM Match : Pkinase (HMM E-Value=0.17)
Length = 152
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 170 GLGWDGITKATKPKVFPMDPPNDTDPDE 253
G+ WDG+ ++ P++ P PP + +E
Sbjct: 119 GVDWDGLPESKAPELLPYLPPTSSTEEE 146
>SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1612
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 205 TQGIPNGPAQRHGPG*KIARVQQNDQKLTDLNWNNIKNISDEKFE-KLFEALKSNSHVE 378
T G+P+ + G K+ ++ +N+QK+ D +K++ +E+ E ++ + L VE
Sbjct: 1379 TLGMPSSSLNQTQHGRKVDKLTENEQKICD---QQVKSLVNERIEAEMIDKLNDGKQVE 1434
>SB_27476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 4 PVSRVAXXXXXXGIRGWPQDQ*SPPVMQCREPVRIHLDD-ESGPVSRVASEQGPARRTRM 180
P +V+ G RGW + + R+P + ESGP+S++AS Q A
Sbjct: 264 PDCKVSFHVFSEGSRGWNSNLIRARRRKRRQPAKSQQSAIESGPISQIASLQSGAVPRSR 323
Query: 181 GR 186
GR
Sbjct: 324 GR 325
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = -2
Query: 689 RRDPVPRVAVLEVQPETQQGRILFDELSYLHLDLVTENLRSLVGGPELLDGVGXQQRAHE 510
+ DP+ VA V +++ R L L L LVTE G + DG+ H+
Sbjct: 339 KSDPLMEVAQSAVASSSKKARPLSASLENL---LVTEKTSGKTEGKQRRDGIDELSDGHQ 395
Query: 509 RTSAGGEM 486
R A M
Sbjct: 396 RVKASSGM 403
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 55 PQDQ*SPPVMQCREPVRIHLDDESGPVSRVASEQGPARRTRMGRHHQS 198
PQ + SPP M REP + DE G RV P R G Q+
Sbjct: 227 PQPKTSPPAMVKREPCMV---DEEGHEHRVTPPSFPTAPPRAGYDPQN 271
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVE 477
+ + + + E L N+ ++ +SL + ++ ALA+AL+ NT LRVL +E
Sbjct: 1041 SFKSDSVKAIAEVLSQNTTLQDMSL-RLHCSEVVV-ALANALKQNTTLRVLKLE 1092
>SB_28804| Best HMM Match : DUF1556 (HMM E-Value=5.1)
Length = 259
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 560 QPEIASSR*QDRDGDNSARRTESDPAASRAAPRVQRREAQGRVASP 697
+P+ AS R Q R+ E + RA+PR Q RE++ ASP
Sbjct: 60 EPQRASPREQARESKPGESEPER-ASPGRASPREQARESEPERASP 104
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,428,104
Number of Sequences: 59808
Number of extensions: 355522
Number of successful extensions: 1289
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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