Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0152
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121019-1|AAI21020.1| 560|Homo sapiens leiomodin 3 (fetal) pro... 74 6e-13
AK057852-1|BAB71596.1| 348|Homo sapiens protein ( Homo sapiens ... 74 6e-13
M77016-1|AAA61224.1| 359|Homo sapiens tropomodulin protein. 70 8e-12
BC002660-1|AAH02660.1| 359|Homo sapiens tropomodulin 1 protein. 70 8e-12
AL162385-2|CAI12855.1| 232|Homo sapiens tropomodulin 1 protein. 70 8e-12
AL162385-1|CAI12854.1| 359|Homo sapiens tropomodulin 1 protein. 70 8e-12
AF288155-1|AAG30124.1| 359|Homo sapiens erythrocyte tropomoduli... 70 8e-12
BC017810-1|AAH17810.1| 345|Homo sapiens tropomodulin 4 (muscle)... 69 1e-11
AL592424-9|CAI16383.1| 345|Homo sapiens tropomodulin 4 (muscle)... 69 1e-11
AF393375-1|AAM73676.1| 345|Homo sapiens tropomodulin 4 protein. 69 1e-11
AF321183-1|AAK06765.1| 345|Homo sapiens muscle tropomodulin pro... 69 1e-11
AF177173-1|AAF31672.1| 345|Homo sapiens tropomodulin 4 protein. 69 1e-11
AF165217-1|AAF01277.1| 345|Homo sapiens Sk-tropomodulin protein. 69 1e-11
BC020542-1|AAH20542.1| 352|Homo sapiens tropomodulin 3 (ubiquit... 62 2e-09
AF237631-1|AAF45299.1| 352|Homo sapiens ubiquitous tropomodulin... 62 2e-09
AF177171-1|AAF31670.1| 352|Homo sapiens tropomodulin 3 protein. 62 2e-09
BC080187-1|AAH80187.1| 600|Homo sapiens leiomodin 1 (smooth mus... 60 8e-09
AL513217-2|CAH72278.1| 631|Homo sapiens leiomodin 1 (smooth mus... 60 8e-09
BC064961-1|AAH64961.1| 351|Homo sapiens tropomodulin 2 (neurona... 59 2e-08
BC036184-1|AAH36184.1| 307|Homo sapiens TMOD2 protein protein. 59 2e-08
AF177169-1|AAF31668.1| 351|Homo sapiens tropomodulin 2 protein. 59 2e-08
X54162-1|CAA38101.1| 572|Homo sapiens 64 Kd autoantigen protein. 58 2e-08
BC040339-1|AAH40339.1| 953|Homo sapiens NOD1 protein protein. 48 3e-05
AF149774-1|AAD43922.1| 953|Homo sapiens NOD1 protein protein. 48 3e-05
AF126484-1|AAD29125.1| 953|Homo sapiens CARD4 protein. 48 3e-05
AF113925-1|AAD28350.1| 953|Homo sapiens Nod1 protein. 48 3e-05
AC006027-1|AAS46897.1| 953|Homo sapiens unknown protein. 48 3e-05
AL137543-1|CAB70801.1| 89|Homo sapiens hypothetical protein pr... 45 2e-04
AK092700-1|BAC03951.1| 128|Homo sapiens protein ( Homo sapiens ... 43 0.001
BC108661-1|AAI08662.1| 316|Homo sapiens chromosome 6 open readi... 36 0.11
BC107130-1|AAI07131.1| 238|Homo sapiens C6orf154 protein protein. 36 0.11
AL355802-5|CAI42621.1| 316|Homo sapiens protein ( Human DNA seq... 36 0.11
AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein. 35 0.35
AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein. 35 0.35
AF501292-1|AAM22460.1| 195|Homo sapiens CARD15-like protein pro... 34 0.60
AF501291-1|AAM22459.1| 223|Homo sapiens CARD15-like protein pro... 34 0.60
S51236-1|AAB24637.1| 887|Homo sapiens collagen VII protein. 33 1.4
M96984-1|AAA36357.1| 884|Homo sapiens type VII collagen protein. 33 1.4
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 33 1.4
BC032841-1|AAH32841.1| 419|Homo sapiens leucine rich repeat con... 33 1.4
AL160037-1|CAH72024.1| 1371|Homo sapiens leucine rich repeat con... 32 1.8
AL024509-3|CAI21665.1| 1371|Homo sapiens leucine rich repeat con... 32 1.8
AL022170-1|CAI21583.1| 1371|Homo sapiens leucine rich repeat con... 32 1.8
AK125696-1|BAC86250.1| 499|Homo sapiens protein ( Homo sapiens ... 32 1.8
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 32 2.4
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 32 2.4
D13694-1|BAA02853.1| 1080|Homo sapiens type VII collagen protein. 32 2.4
AL365443-4|CAH71447.1| 474|Homo sapiens PRAME family member 13 ... 32 2.4
AJ303140-1|CAC42117.1| 1013|Homo sapiens LRR-containing protein ... 31 4.3
AF178930-1|AAG33677.1| 1040|Homo sapiens NOD2 protein protein. 31 4.3
AY154460-1|AAO18156.1| 1200|Homo sapiens NALP5 protein. 31 5.6
AY054986-1|AAL15549.1| 1200|Homo sapiens maternal-antigen-that-e... 31 5.6
BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein do... 30 7.4
BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein do... 30 7.4
BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein do... 30 7.4
AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens ... 30 7.4
AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein. 30 7.4
AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein. 30 7.4
AL592424-10|CAI16384.1| 142|Homo sapiens tropomodulin 4 (muscle... 30 9.8
>BC121019-1|AAI21020.1| 560|Homo sapiens leiomodin 3 (fetal)
protein.
Length = 560
Score = 73.7 bits (173), Expect = 6e-13
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV++ND + +LN NNI+NI E A+K N H++ SL NVG + A ALA+
Sbjct: 245 LRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAFALAN 304
Query: 436 ALRHNTALRVLSVETNFISPPALV 507
LR N ++ L++E+NFI+ +V
Sbjct: 305 MLRENRSITTLNIESNFITGKGIV 328
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E R NQR +LG+ EMEI +L++ N TLL++G H E R V + L RN D+
Sbjct: 339 TLTELRFHNQR-HMLGHHAEMEIARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQ 397
Query: 717 RQQ 725
RQ+
Sbjct: 398 RQK 400
>AK057852-1|BAB71596.1| 348|Homo sapiens protein ( Homo sapiens
cDNA FLJ25123 fis, clone CBR06154. ).
Length = 348
Score = 73.7 bits (173), Expect = 6e-13
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV++ND + +LN NNI+NI E A+K N H++ SL NVG + A ALA+
Sbjct: 149 LRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAFALAN 208
Query: 436 ALRHNTALRVLSVETNFISPPALV 507
LR N ++ L++E+NFI+ +V
Sbjct: 209 MLRENRSITTLNIESNFITGKGIV 232
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E R NQR +LG+ EMEI +L++ N TLL++G H E R V + L RN D+
Sbjct: 243 TLTELRFHNQR-HMLGHHAEMEIARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQ 301
Query: 717 RQQ 725
RQ+
Sbjct: 302 RQK 304
>M77016-1|AAA61224.1| 359|Homo sapiens tropomodulin protein.
Length = 359
Score = 70.1 bits (164), Expect = 8e-12
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ R++ ND KL ++N NNI+NI + EALK NS+V+ S+V D A ALA+
Sbjct: 187 LERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVAYALAE 246
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L+ L+VE+NFIS
Sbjct: 247 MLKENKVLKTLNVESNFIS 265
Score = 52.4 bits (120), Expect = 2e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 546 EFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRIRQQ 725
E + NQ SQ LGNK+EMEI ++E+N TLL+ G H R R ++ + N D +R++
Sbjct: 284 EMKIDNQ-SQPLGNKVEMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKR 342
Score = 36.7 bits (81), Expect = 0.086
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 253 FIRVRVVGRVHWEYLGFSGFGDAVP--SESDGLALVQKRRV---ILVLIHHRDEYEQALG 89
F R ++ + + F D VP E G V K++ +L + E E+AL
Sbjct: 62 FKREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
Query: 88 TASQEEIIDLAAILGFHSMM 29
AS E+ D+AAILG H++M
Sbjct: 122 NASDAELCDIAAILGMHTLM 141
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 83 CSAESLFVFISMMNQDQYHASLLNKGQPVGLGWDGITKATKPKVFPMDPPNDTDPDE 253
C ++ ++M+ QY+ +L + G + + K T+ K P + PN TD +E
Sbjct: 129 CDIAAILGMHTLMSNQQYYQALSSSSIMNKEGLNSVIKPTQYKPVPDEEPNSTDVEE 185
>BC002660-1|AAH02660.1| 359|Homo sapiens tropomodulin 1 protein.
Length = 359
Score = 70.1 bits (164), Expect = 8e-12
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ R++ ND KL ++N NNI+NI + EALK NS+V+ S+V D A ALA+
Sbjct: 187 LERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVAYALAE 246
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L+ L+VE+NFIS
Sbjct: 247 MLKENKVLKTLNVESNFIS 265
Score = 52.4 bits (120), Expect = 2e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 546 EFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRIRQQ 725
E + NQ SQ LGNK+EMEI ++E+N TLL+ G H R R ++ + N D +R++
Sbjct: 284 EMKIDNQ-SQPLGNKVEMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKR 342
Score = 36.7 bits (81), Expect = 0.086
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 253 FIRVRVVGRVHWEYLGFSGFGDAVP--SESDGLALVQKRRV---ILVLIHHRDEYEQALG 89
F R ++ + + F D VP E G V K++ +L + E E+AL
Sbjct: 62 FKREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
Query: 88 TASQEEIIDLAAILGFHSMM 29
AS E+ D+AAILG H++M
Sbjct: 122 NASDAELCDIAAILGMHTLM 141
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 83 CSAESLFVFISMMNQDQYHASLLNKGQPVGLGWDGITKATKPKVFPMDPPNDTDPDE 253
C ++ ++M+ QY+ +L + G + + K T+ K P + PN TD +E
Sbjct: 129 CDIAAILGMHTLMSNQQYYQALSSSSIMNKEGLNSVIKPTQYKPVPDEEPNSTDVEE 185
>AL162385-2|CAI12855.1| 232|Homo sapiens tropomodulin 1 protein.
Length = 232
Score = 70.1 bits (164), Expect = 8e-12
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ R++ ND KL ++N NNI+NI + EALK NS+V+ S+V D A ALA+
Sbjct: 60 LERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVAYALAE 119
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L+ L+VE+NFIS
Sbjct: 120 MLKENKVLKTLNVESNFIS 138
Score = 52.4 bits (120), Expect = 2e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 546 EFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRIRQQ 725
E + NQ SQ LGNK+EMEI ++E+N TLL+ G H R R ++ + N D +R++
Sbjct: 157 EMKIDNQ-SQPLGNKVEMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKR 215
>AL162385-1|CAI12854.1| 359|Homo sapiens tropomodulin 1 protein.
Length = 359
Score = 70.1 bits (164), Expect = 8e-12
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ R++ ND KL ++N NNI+NI + EALK NS+V+ S+V D A ALA+
Sbjct: 187 LERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVAYALAE 246
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L+ L+VE+NFIS
Sbjct: 247 MLKENKVLKTLNVESNFIS 265
Score = 52.4 bits (120), Expect = 2e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 546 EFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRIRQQ 725
E + NQ SQ LGNK+EMEI ++E+N TLL+ G H R R ++ + N D +R++
Sbjct: 284 EMKIDNQ-SQPLGNKVEMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKR 342
Score = 36.7 bits (81), Expect = 0.086
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 253 FIRVRVVGRVHWEYLGFSGFGDAVP--SESDGLALVQKRRV---ILVLIHHRDEYEQALG 89
F R ++ + + F D VP E G V K++ +L + E E+AL
Sbjct: 62 FKREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
Query: 88 TASQEEIIDLAAILGFHSMM 29
AS E+ D+AAILG H++M
Sbjct: 122 NASDAELCDIAAILGMHTLM 141
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 83 CSAESLFVFISMMNQDQYHASLLNKGQPVGLGWDGITKATKPKVFPMDPPNDTDPDE 253
C ++ ++M+ QY+ +L + G + + K T+ K P + PN TD +E
Sbjct: 129 CDIAAILGMHTLMSNQQYYQALSSSSIMNKEGLNSVIKPTQYKPVPDEEPNSTDVEE 185
>AF288155-1|AAG30124.1| 359|Homo sapiens erythrocyte tropomodulin
protein.
Length = 359
Score = 70.1 bits (164), Expect = 8e-12
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ R++ ND KL ++N NNI+NI + EALK NS+V+ S+V D A ALA+
Sbjct: 187 LERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVAYALAE 246
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L+ L+VE+NFIS
Sbjct: 247 MLKENKVLKTLNVESNFIS 265
Score = 52.4 bits (120), Expect = 2e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 546 EFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRIRQQ 725
E + NQ SQ LGNK+EMEI ++E+N TLL+ G H R R ++ + N D +R++
Sbjct: 284 EMKIDNQ-SQPLGNKVEMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKR 342
Score = 36.7 bits (81), Expect = 0.086
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 253 FIRVRVVGRVHWEYLGFSGFGDAVP--SESDGLALVQKRRV---ILVLIHHRDEYEQALG 89
F R ++ + + F D VP E G V K++ +L + E E+AL
Sbjct: 62 FKREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
Query: 88 TASQEEIIDLAAILGFHSMM 29
AS E+ D+AAILG H++M
Sbjct: 122 NASDAELCDIAAILGMHTLM 141
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 83 CSAESLFVFISMMNQDQYHASLLNKGQPVGLGWDGITKATKPKVFPMDPPNDTDPDE 253
C ++ ++M+ QY+ +L + G + + K T+ K P + PN TD +E
Sbjct: 129 CDIAAILGMHTLMSNQQYYQALSSSSIMNKEGLNSVIKPTQYKPVPDEEPNSTDVEE 185
>BC017810-1|AAH17810.1| 345|Homo sapiens tropomodulin 4 (muscle)
protein.
Length = 345
Score = 69.3 bits (162), Expect = 1e-11
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND++L ++N NNI++I +L EA+K+N++V SLV D A A+AD
Sbjct: 187 LKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVAD 246
Query: 436 ALRHNTALRVLSVETNFISPPALV 507
LR N +L+ L++E+NFIS L+
Sbjct: 247 MLRENRSLQSLNIESNFISSTGLM 270
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E R NQR Q G+ +EME+ ++EQ P+++R G H R R A + RN +
Sbjct: 281 TLTELRVDNQR-QWPGDAVEMEMATVLEQRPSIVRFGYHFTQQGPRARAAQAMTRNNELR 339
Query: 717 RQQ 725
RQQ
Sbjct: 340 RQQ 342
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -3
Query: 190 DAVP--SESDGLALVQKRRVILV--LIHHRDEYEQALGTASQEEIIDLAAILGFHSMMIQ 23
D VP E G +Q +R I I E E+AL A+ E+ D+AAIL +++M
Sbjct: 84 DLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSN 143
Query: 22 KR 17
K+
Sbjct: 144 KQ 145
>AL592424-9|CAI16383.1| 345|Homo sapiens tropomodulin 4 (muscle)
protein.
Length = 345
Score = 69.3 bits (162), Expect = 1e-11
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND++L ++N NNI++I +L EA+K+N++V SLV D A A+AD
Sbjct: 187 LKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVAD 246
Query: 436 ALRHNTALRVLSVETNFISPPALV 507
LR N +L+ L++E+NFIS L+
Sbjct: 247 MLRENRSLQSLNIESNFISSTGLM 270
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E R NQR Q G+ +EME+ ++EQ P+++R G H R R A + RN +
Sbjct: 281 TLTELRVDNQR-QWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELR 339
Query: 717 RQQ 725
RQQ
Sbjct: 340 RQQ 342
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -3
Query: 190 DAVP--SESDGLALVQKRRVILV--LIHHRDEYEQALGTASQEEIIDLAAILGFHSMMIQ 23
D VP E G +Q +R I I E E+AL A+ E+ D+AAIL +++M
Sbjct: 84 DLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSN 143
Query: 22 KR 17
K+
Sbjct: 144 KQ 145
>AF393375-1|AAM73676.1| 345|Homo sapiens tropomodulin 4 protein.
Length = 345
Score = 69.3 bits (162), Expect = 1e-11
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND++L ++N NNI++I +L EA+K+N++V SLV D A A+AD
Sbjct: 187 LKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVAD 246
Query: 436 ALRHNTALRVLSVETNFISPPALV 507
LR N +L+ L++E+NFIS L+
Sbjct: 247 MLRENRSLQSLNIESNFISSTGLM 270
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E R NQR Q G+ +EME+ ++EQ P+++R G H R R A + RN +
Sbjct: 281 TLTELRVDNQR-QWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELR 339
Query: 717 RQQ 725
RQQ
Sbjct: 340 RQQ 342
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -3
Query: 190 DAVP--SESDGLALVQKRRVILV--LIHHRDEYEQALGTASQEEIIDLAAILGFHSMMIQ 23
D VP E G +Q +R I I E E+AL A+ E+ D+AAIL +++M
Sbjct: 84 DLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSN 143
Query: 22 KR 17
K+
Sbjct: 144 KQ 145
>AF321183-1|AAK06765.1| 345|Homo sapiens muscle tropomodulin
protein.
Length = 345
Score = 69.3 bits (162), Expect = 1e-11
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND++L ++N NNI++I +L EA+K+N++V SLV D A A+AD
Sbjct: 187 LKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVAD 246
Query: 436 ALRHNTALRVLSVETNFISPPALV 507
LR N +L+ L++E+NFIS L+
Sbjct: 247 MLRENRSLQSLNIESNFISSTGLM 270
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E R NQR Q G+ +EME+ ++EQ P+++R G H R R A + RN +
Sbjct: 281 TLTELRVDNQR-QWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELR 339
Query: 717 RQQ 725
RQQ
Sbjct: 340 RQQ 342
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -3
Query: 190 DAVP--SESDGLALVQKRRVILV--LIHHRDEYEQALGTASQEEIIDLAAILGFHSMMIQ 23
D VP E G +Q +R I I E E+AL A+ E+ D+AAIL +++M
Sbjct: 84 DLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSN 143
Query: 22 KR 17
K+
Sbjct: 144 KQ 145
>AF177173-1|AAF31672.1| 345|Homo sapiens tropomodulin 4 protein.
Length = 345
Score = 69.3 bits (162), Expect = 1e-11
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND++L ++N NNI++I +L EA+K+N++V SLV D A A+AD
Sbjct: 187 LKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVAD 246
Query: 436 ALRHNTALRVLSVETNFISPPALV 507
LR N +L+ L++E+NFIS L+
Sbjct: 247 MLRENRSLQSLNIESNFISSTGLM 270
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E R NQR Q G+ +EME+ ++EQ P+++R G H R R A + RN +
Sbjct: 281 TLTELRVDNQR-QWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELR 339
Query: 717 RQQ 725
RQQ
Sbjct: 340 RQQ 342
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -3
Query: 190 DAVP--SESDGLALVQKRRVILV--LIHHRDEYEQALGTASQEEIIDLAAILGFHSMMIQ 23
D VP E G +Q +R I I E E+AL A+ E+ D+AAIL +++M
Sbjct: 84 DLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSN 143
Query: 22 KR 17
K+
Sbjct: 144 KQ 145
>AF165217-1|AAF01277.1| 345|Homo sapiens Sk-tropomodulin protein.
Length = 345
Score = 69.3 bits (162), Expect = 1e-11
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND++L ++N NNI++I +L EA+K+N++V SLV D A A+AD
Sbjct: 187 LKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVAD 246
Query: 436 ALRHNTALRVLSVETNFISPPALV 507
LR N +L+ L++E+NFIS L+
Sbjct: 247 MLRENRSLQSLNIESNFISSTGLM 270
Score = 46.8 bits (106), Expect = 8e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E R NQR Q G+ +EME+ ++EQ P+++R G H R R A + RN +
Sbjct: 281 TLIELRVDNQR-QWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELR 339
Query: 717 RQQ 725
RQQ
Sbjct: 340 RQQ 342
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -3
Query: 190 DAVP--SESDGLALVQKRRVILV--LIHHRDEYEQALGTASQEEIIDLAAILGFHSMMIQ 23
D VP E G +Q +R I I E E+AL A+ E+ D+AAIL +++M
Sbjct: 84 DLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSN 143
Query: 22 KR 17
K+
Sbjct: 144 KQ 145
>BC020542-1|AAH20542.1| 352|Homo sapiens tropomodulin 3
(ubiquitous) protein.
Length = 352
Score = 62.1 bits (144), Expect = 2e-09
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ R ++ND L ++N NNIKNI + +AL++N+HV+ SL D A A A+
Sbjct: 190 LKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAE 249
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L+ L+VE+NFI+
Sbjct: 250 MLKVNKTLKSLNVESNFIT 268
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E + NQR Q LG +E+E+ +++E+N +L+ G R R A+ + +N D +
Sbjct: 284 TLAELKIDNQRQQ-LGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLV 342
Query: 717 RQQ 725
R++
Sbjct: 343 RKR 345
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = -3
Query: 253 FIRVRVVGRVHWEYLGFSGFGDAVP--SESDGLALVQKRRVILVLIHHR----DEYEQAL 92
F R ++ + E L D VP E G + K++ + + E E+AL
Sbjct: 64 FDREHLLSYLEKEALEHKDREDYVPYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEAL 123
Query: 91 GTASQEEIIDLAAILGFHSMM 29
+AS E+ DLAAILG H+++
Sbjct: 124 TSASDTELCDLAAILGMHNLI 144
>AF237631-1|AAF45299.1| 352|Homo sapiens ubiquitous tropomodulin
U-Tmod protein.
Length = 352
Score = 62.1 bits (144), Expect = 2e-09
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ R ++ND L ++N NNIKNI + +AL++N+HV+ SL D A A A+
Sbjct: 190 LKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAE 249
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L+ L+VE+NFI+
Sbjct: 250 MLKVNKTLKSLNVESNFIT 268
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E + NQR Q LG +E+E+ +++E+N +L+ G R R A+ + +N D +
Sbjct: 284 TLAELKIDNQRQQ-LGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLV 342
Query: 717 RQQ 725
R++
Sbjct: 343 RKR 345
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = -3
Query: 253 FIRVRVVGRVHWEYLGFSGFGDAVP--SESDGLALVQKRRVILVLIHHR----DEYEQAL 92
F R ++ + E L D VP E G + K++ + + E E+AL
Sbjct: 64 FDREHLLSYLEKEALEHKDREDYVPYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEAL 123
Query: 91 GTASQEEIIDLAAILGFHSMM 29
+AS E+ DLAAILG H+++
Sbjct: 124 TSASDTELCDLAAILGMHNLI 144
>AF177171-1|AAF31670.1| 352|Homo sapiens tropomodulin 3 protein.
Length = 352
Score = 62.1 bits (144), Expect = 2e-09
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ R ++ND L ++N NNIKNI + +AL++N+HV+ SL D A A A+
Sbjct: 190 LKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAE 249
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L+ L+VE+NFI+
Sbjct: 250 MLKVNKTLKSLNVESNFIT 268
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E + NQR Q LG +E+E+ +++E+N +L+ G R R A+ + +N D +
Sbjct: 284 TLAELKIDNQRQQ-LGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLV 342
Query: 717 RQQ 725
R++
Sbjct: 343 RKR 345
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = -3
Query: 253 FIRVRVVGRVHWEYLGFSGFGDAVP--SESDGLALVQKRRVILVLIHHR----DEYEQAL 92
F R ++ + E L D VP E G + K++ + + E E+AL
Sbjct: 64 FDREHLLSYLEKEALEHKDREDYVPYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEAL 123
Query: 91 GTASQEEIIDLAAILGFHSMM 29
+AS E+ DLAAILG H+++
Sbjct: 124 TSASDTELCDLAAILGMHNLI 144
>BC080187-1|AAH80187.1| 600|Homo sapiens leiomodin 1 (smooth
muscle) protein.
Length = 600
Score = 60.1 bits (139), Expect = 8e-09
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +3
Query: 534 NTVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDR 713
NT+ E R NQR + G K EMEI +L+++N TLL+LG H E + R V + L RN+D+
Sbjct: 415 NTLTELRFHNQR-HICGGKTEMEIAKLLKENTTLLKLGYHFELAGPRMTVTNLLSRNMDK 473
Query: 714 IRQQ 725
RQ+
Sbjct: 474 QRQK 477
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND ++T++N NN I++E + EAL+ N+ V++ +L N D A A+A
Sbjct: 322 LERVKNNDPEMTEVNVNNSDCITNEILVRFTEALEFNTVVKLFALANTRADDHVAFAIAI 381
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N + L++++N I+
Sbjct: 382 MLKANKTITSLNLDSNHIT 400
>AL513217-2|CAH72278.1| 631|Homo sapiens leiomodin 1 (smooth
muscle) protein.
Length = 631
Score = 60.1 bits (139), Expect = 8e-09
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +3
Query: 534 NTVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDR 713
NT+ E R NQR + G K EMEI +L+++N TLL+LG H E + R V + L RN+D+
Sbjct: 415 NTLTELRFHNQR-HICGGKTEMEIAKLLKENTTLLKLGYHFELAGPRMTVTNLLSRNMDK 473
Query: 714 IRQQ 725
RQ+
Sbjct: 474 QRQK 477
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND ++T++N NN I++E + EAL+ N+ V++ +L N D A A+A
Sbjct: 322 LERVKNNDPEMTEVNVNNSDCITNEILVRFTEALEFNTVVKLFALANTRADDHVAFAIAI 381
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N + L++++N I+
Sbjct: 382 MLKANKTITSLNLDSNHIT 400
>BC064961-1|AAH64961.1| 351|Homo sapiens tropomodulin 2 (neuronal)
protein.
Length = 351
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ +++ ND L ++N NNIKNI + +AL++N+HV+ SL D A A AD
Sbjct: 189 LQQMKANDPSLQEVNLNNIKNIPIPTLREFAKALETNTHVKKFSLAATRSNDPVAIAFAD 248
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L L++E+NFI+
Sbjct: 249 MLKVNKTLTSLNIESNFIT 267
Score = 50.4 bits (115), Expect = 7e-06
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 534 NTVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDR 713
+T+ E + NQR Q LG +EMEI Q++E+N +L+ G R RVA+ + +N D
Sbjct: 282 DTLTEIKIDNQRQQ-LGTAVEMEIAQMLEENSRILKFGYQFTKQGPRTRVAAAITKNNDL 340
Query: 714 IRQQ 725
+R++
Sbjct: 341 VRKK 344
Score = 34.7 bits (76), Expect = 0.35
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -3
Query: 109 EYEQALGTASQEEIIDLAAILGFHSMM 29
E E+AL +AS E+ DLAA+LG H+++
Sbjct: 118 ELEEALASASDTELYDLAAVLGVHNLL 144
>BC036184-1|AAH36184.1| 307|Homo sapiens TMOD2 protein protein.
Length = 307
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ +++ ND L ++N NNIKNI + +AL++N+HV+ SL D A A AD
Sbjct: 145 LQQMKANDPSLQEVNLNNIKNIPIPTLREFAKALETNTHVKKFSLAATRSNDPVAIAFAD 204
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L L++E+NFI+
Sbjct: 205 MLKVNKTLTSLNIESNFIT 223
Score = 50.4 bits (115), Expect = 7e-06
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 534 NTVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDR 713
+T+ E + NQR Q LG +EMEI Q++E+N +L+ G R RVA+ + +N D
Sbjct: 238 DTLTEIKIDNQRQQ-LGTAVEMEIAQMLEENSRILKFGYQFTKQGPRTRVAAAITKNNDL 296
Query: 714 IRQQ 725
+R++
Sbjct: 297 VRKK 300
Score = 34.7 bits (76), Expect = 0.35
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -3
Query: 109 EYEQALGTASQEEIIDLAAILGFHSMM 29
E E+AL +AS E+ DLAA+LG H+++
Sbjct: 74 ELEEALASASDTELYDLAAVLGVHNLL 100
>AF177169-1|AAF31668.1| 351|Homo sapiens tropomodulin 2 protein.
Length = 351
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ +++ ND L ++N NNIKNI + +AL++N+HV+ SL D A A AD
Sbjct: 189 LQQMKANDPSLQEVNLNNIKNIPIPTLREFAKALETNTHVKKFSLAATRSNDPVAIAFAD 248
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N L L++E+NFI+
Sbjct: 249 MLKVNKTLTSLNIESNFIT 267
Score = 50.4 bits (115), Expect = 7e-06
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 534 NTVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDR 713
+T+ E + NQR Q LG +EMEI Q++E+N +L+ G R RVA+ + +N D
Sbjct: 282 DTLTEIKIDNQRQQ-LGTAVEMEIAQMLEENSRILKFGYQFTKQGPRTRVAAAITKNNDL 340
Query: 714 IRQQ 725
+R++
Sbjct: 341 VRKK 344
Score = 34.7 bits (76), Expect = 0.35
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -3
Query: 109 EYEQALGTASQEEIIDLAAILGFHSMM 29
E E+AL +AS E+ DLAA+LG H+++
Sbjct: 118 ELEEALASASDTELYDLAAVLGVHNLL 144
>X54162-1|CAA38101.1| 572|Homo sapiens 64 Kd autoantigen protein.
Length = 572
Score = 58.4 bits (135), Expect = 2e-08
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 534 NTVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDR 713
NT+ E R NQR + G K EMEI +L+++N +LL+LG H E + R V + L RN+D+
Sbjct: 387 NTLTELRFHNQR-HICGGKTEMEIAKLLKENTSLLKLGYHFELAGPRMTVTNLLSRNMDK 445
Query: 714 IRQQ 725
RQ+
Sbjct: 446 QRQK 449
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND ++T++N NN I++E + EAL+ N+ V++ +L N D A A+A
Sbjct: 294 LERVKNNDPEMTEVNVNNSDCITNEILVRFTEALEFNTVVKLFALANTRADDHVAFAIAI 353
Query: 436 ALRHNTALRVLSVETNFIS 492
L+ N + L++++N I+
Sbjct: 354 MLKANKTITSLNLDSNHIT 372
>BC040339-1|AAH40339.1| 953|Homo sapiens NOD1 protein protein.
Length = 953
Score = 48.0 bits (109), Expect = 3e-05
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 121 ESGPVSRVASEQGPARRTRMGRHHQSH*TQGIPNGPAQRHGPG*KIARVQQNDQKLTDLN 300
E G ++G R+H S T + + G G +AR Q + L ++
Sbjct: 816 EVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEG-GKSLARALQQNTSL-EIL 873
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVET 480
W ++DE E L E LK N ++ L L+ +T + LADAL+ NT + + +
Sbjct: 874 WLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNG 933
Query: 481 NFISP 495
N I P
Sbjct: 934 NLIKP 938
>AF149774-1|AAD43922.1| 953|Homo sapiens NOD1 protein protein.
Length = 953
Score = 48.0 bits (109), Expect = 3e-05
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 121 ESGPVSRVASEQGPARRTRMGRHHQSH*TQGIPNGPAQRHGPG*KIARVQQNDQKLTDLN 300
E G ++G R+H S T + + G G +AR Q + L ++
Sbjct: 816 EVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEG-GKSLARALQQNTSL-EIL 873
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVET 480
W ++DE E L E LK N ++ L L+ +T + LADAL+ NT + + +
Sbjct: 874 WLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNG 933
Query: 481 NFISP 495
N I P
Sbjct: 934 NLIKP 938
>AF126484-1|AAD29125.1| 953|Homo sapiens CARD4 protein.
Length = 953
Score = 48.0 bits (109), Expect = 3e-05
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 121 ESGPVSRVASEQGPARRTRMGRHHQSH*TQGIPNGPAQRHGPG*KIARVQQNDQKLTDLN 300
E G ++G R+H S T + + G G +AR Q + L ++
Sbjct: 816 EVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEG-GKSLARALQQNTSL-EIL 873
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVET 480
W ++DE E L E LK N ++ L L+ +T + LADAL+ NT + + +
Sbjct: 874 WLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNG 933
Query: 481 NFISP 495
N I P
Sbjct: 934 NLIKP 938
>AF113925-1|AAD28350.1| 953|Homo sapiens Nod1 protein.
Length = 953
Score = 48.0 bits (109), Expect = 3e-05
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 121 ESGPVSRVASEQGPARRTRMGRHHQSH*TQGIPNGPAQRHGPG*KIARVQQNDQKLTDLN 300
E G ++G R+H S T + + G G +AR Q + L ++
Sbjct: 816 EVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEG-GKSLARALQQNTSL-EIL 873
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVET 480
W ++DE E L E LK N ++ L L+ +T + LADAL+ NT + + +
Sbjct: 874 WLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNG 933
Query: 481 NFISP 495
N I P
Sbjct: 934 NLIKP 938
>AC006027-1|AAS46897.1| 953|Homo sapiens unknown protein.
Length = 953
Score = 48.0 bits (109), Expect = 3e-05
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 121 ESGPVSRVASEQGPARRTRMGRHHQSH*TQGIPNGPAQRHGPG*KIARVQQNDQKLTDLN 300
E G ++G R+H S T + + G G +AR Q + L ++
Sbjct: 816 EVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEG-GKSLARALQQNTSL-EIL 873
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVET 480
W ++DE E L E LK N ++ L L+ +T + LADAL+ NT + + +
Sbjct: 874 WLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNG 933
Query: 481 NFISP 495
N I P
Sbjct: 934 NLIKP 938
>AL137543-1|CAB70801.1| 89|Homo sapiens hypothetical protein
protein.
Length = 89
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +3
Query: 537 TVEEFRASNQRSQVLGNKIEMEITQLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRI 716
T+ E + NQR Q LG +E+E+ +++E+N +L+ G R R A+ + +N D +
Sbjct: 21 TLAELKIDNQRQQ-LGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLV 79
Query: 717 RQQ 725
R++
Sbjct: 80 RKR 82
>AK092700-1|BAC03951.1| 128|Homo sapiens protein ( Homo sapiens
cDNA FLJ35381 fis, clone SKMUS2007359, highly similar to
Tropomodulin 4 (muscle). ).
Length = 128
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+ RV+ ND++L ++N NNI++I +L EA+K+N++V SLV D A L
Sbjct: 60 LKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANWLTC 119
Query: 436 ALR 444
+R
Sbjct: 120 CVR 122
>BC108661-1|AAI08662.1| 316|Homo sapiens chromosome 6 open reading
frame 154 protein.
Length = 316
Score = 36.3 bits (80), Expect = 0.11
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
IA + ++ +L++N + D L A+ S+ +EVL L GLT+++A L D
Sbjct: 167 IAVAHSSQVRVLNLDYNPL---GDHVAGMLAVAVASSRTLEVLDLEGTGLTNQSAQTLLD 223
Query: 436 AL-RHNTALRVLSVETNFISP 495
+ + TALR L + N ISP
Sbjct: 224 MVENYPTALRSLVLAENSISP 244
Score = 30.3 bits (65), Expect = 7.4
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
+I R L LN N S + ++L EAL++N ++ L L LTD L
Sbjct: 47 RICRALAGATSLAQLNLNLGVVSSPSRIKQLAEALRTNRSIQSLFLHGSPLTDAGLALLN 106
Query: 433 DALRHNTALRVLSV 474
AL + AL L +
Sbjct: 107 PALALHPALVALDL 120
>BC107130-1|AAI07131.1| 238|Homo sapiens C6orf154 protein protein.
Length = 238
Score = 36.3 bits (80), Expect = 0.11
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
IA + ++ +L++N + D L A+ S+ +EVL L GLT+++A L D
Sbjct: 89 IAVAHSSQVRVLNLDYNPL---GDHVAGMLAVAVASSRTLEVLDLEGTGLTNQSAQTLLD 145
Query: 436 AL-RHNTALRVLSVETNFISP 495
+ + TALR L + N ISP
Sbjct: 146 MVENYPTALRSLVLAENSISP 166
>AL355802-5|CAI42621.1| 316|Homo sapiens protein ( Human DNA
sequence from clone RP3-337H4 on chromosome 6 Contains
the3' part of a novel gene, three novel genes, the gene
for RNA ).
Length = 316
Score = 36.3 bits (80), Expect = 0.11
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
IA + ++ +L++N + D L A+ S+ +EVL L GLT+++A L D
Sbjct: 167 IAVAHSSQVRVLNLDYNPL---GDHVAGMLAVAVASSRTLEVLDLEGTGLTNQSAQTLLD 223
Query: 436 AL-RHNTALRVLSVETNFISP 495
+ + TALR L + N ISP
Sbjct: 224 MVENYPTALRSLVLAENSISP 244
Score = 30.3 bits (65), Expect = 7.4
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +1
Query: 253 KIARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALA 432
+I R L LN N S + ++L EAL++N ++ L L LTD L
Sbjct: 47 RICRALAGATSLAQLNLNLGVVSSPSRIKQLAEALRTNRSIQSLFLHGSPLTDAGLALLN 106
Query: 433 DALRHNTALRVLSV 474
AL + AL L +
Sbjct: 107 PALALHPALVALDL 120
>AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein.
Length = 1065
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+AR ++ LT L+ +I + + L +ALK N + LSL + D A ++A+
Sbjct: 686 LARSLLVNRSLTSLDLRG-NSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744
Query: 436 ALRHNTALRVLSVETNFISP 495
AL N L +L ++ N I P
Sbjct: 745 ALASNRTLSMLHLQKNSIGP 764
Score = 34.3 bits (75), Expect = 0.46
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+AR + + LT L + + +I + L EAL N +E+L L + A ALA+
Sbjct: 938 VARALKVNTALTAL-YLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALAN 996
Query: 436 ALRHNTALRVLSVETN 483
AL+ N++LR L+++ N
Sbjct: 997 ALKVNSSLRRLNLQEN 1012
Score = 33.9 bits (74), Expect = 0.60
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 337 EKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFIS 492
+++ +ALK N ++ L + + D A ALA+AL+ N L L +++N IS
Sbjct: 768 QRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 819
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 277 DQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTA 456
++ LT L+ + D+ + EAL SN + +L L + A +ADAL+ N +
Sbjct: 721 NRTLTSLSLQG-NTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRS 779
Query: 457 LRVLSVETNFI 489
L+ L +N I
Sbjct: 780 LKELMFSSNSI 790
>AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein.
Length = 499
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+AR ++ LT L+ +I + + L +ALK N + LSL + D A ++A+
Sbjct: 120 LARSLLVNRSLTSLDLRG-NSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 178
Query: 436 ALRHNTALRVLSVETNFISP 495
AL N L +L ++ N I P
Sbjct: 179 ALASNRTLSMLHLQKNSIGP 198
Score = 34.3 bits (75), Expect = 0.46
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+AR + + LT L + + +I + L EAL N +E+L L + A ALA+
Sbjct: 372 VARALKVNTALTAL-YLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALAN 430
Query: 436 ALRHNTALRVLSVETN 483
AL+ N++LR L+++ N
Sbjct: 431 ALKVNSSLRRLNLQEN 446
Score = 33.9 bits (74), Expect = 0.60
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 337 EKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFIS 492
+++ +ALK N ++ L + + D A ALA+AL+ N L L +++N IS
Sbjct: 202 QRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 253
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 277 DQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTA 456
++ LT L+ + D+ + EAL SN + +L L + A +ADAL+ N +
Sbjct: 155 NRTLTSLSLQG-NTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRS 213
Query: 457 LRVLSVETNFI 489
L+ L +N I
Sbjct: 214 LKELMFSSNSI 224
>AF501292-1|AAM22460.1| 195|Homo sapiens CARD15-like protein
protein.
Length = 195
Score = 33.9 bits (74), Expect = 0.60
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 337 EKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFIS 492
+++ +ALK N ++ L + + D A ALA+AL+ N L L +++N IS
Sbjct: 68 QRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 119
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFISP 495
+I + + L +ALK N + LSL + D A ++A+AL N L +L ++ N I P
Sbjct: 5 SIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGP 64
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 277 DQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTA 456
++ LT L+ + D+ + EAL SN + +L L + A +ADAL+ N +
Sbjct: 21 NRTLTSLSLQG-NTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRS 79
Query: 457 LRVLSVETNFI 489
L+ L +N I
Sbjct: 80 LKELMFSSNSI 90
Score = 32.7 bits (71), Expect = 1.4
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
+A + +Q L L+ + +ISD L AL +N + LSL ++ A A+A
Sbjct: 98 LAEALKVNQGLESLDLQS-NSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAH 156
Query: 436 ALRHNTALRVLSVETNFISPPA 501
AL N+ L+ L ++ NFI A
Sbjct: 157 ALCANSTLKNLDLQWNFIQAGA 178
>AF501291-1|AAM22459.1| 223|Homo sapiens CARD15-like protein
protein.
Length = 223
Score = 33.9 bits (74), Expect = 0.60
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 337 EKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFIS 492
+++ +ALK N ++ L + + D A ALA+AL+ N L L +++N IS
Sbjct: 68 QRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 119
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 316 NISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVETNFISP 495
+I + + L +ALK N + LSL + D A ++A+AL N L +L ++ N I P
Sbjct: 5 SIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGP 64
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 277 DQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTA 456
++ LT L+ + D+ + EAL SN + +L L + A +ADAL+ N +
Sbjct: 21 NRTLTSLSLQG-NTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRS 79
Query: 457 LRVLSVETNFI 489
L+ L +N I
Sbjct: 80 LKELMFSSNSI 90
>S51236-1|AAB24637.1| 887|Homo sapiens collagen VII protein.
Length = 887
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 701 SLEMRRDPVPRVA--VLEVQPE--TQQGRILFDELSYLHLD 591
SL +R +PVPR +L QPE +Q R+L ELS HLD
Sbjct: 514 SLRLRWEPVPRAQGFLLHWQPEGGQEQSRVLGPELSSYHLD 554
>M96984-1|AAA36357.1| 884|Homo sapiens type VII collagen protein.
Length = 884
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 701 SLEMRRDPVPRVA--VLEVQPE--TQQGRILFDELSYLHLD 591
SL +R +PVPR +L QPE +Q R+L ELS HLD
Sbjct: 511 SLRLRWEPVPRAQGFLLHWQPEGGQEQSRVLGPELSSYHLD 551
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 701 SLEMRRDPVPRVA--VLEVQPE--TQQGRILFDELSYLHLD 591
SL +R +PVPR +L QPE +Q R+L ELS HLD
Sbjct: 882 SLRLRWEPVPRAQGFLLHWQPEGGQEQSRVLGPELSSYHLD 922
>BC032841-1|AAH32841.1| 419|Homo sapiens leucine rich repeat
containing 34 protein.
Length = 419
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 343 LFEALKSNSHVEVLSLVNVGLTDRTAGALADALR-HNTALRVLSVETNFISPPALV 507
L + LKSN+ +EV+ L + + A L++ L HN +L+ LSV +N I LV
Sbjct: 269 LADVLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLV 324
>AL160037-1|CAH72024.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
IA ++ N Q T L+ ++K +S + E++ + ++ +E L L N GL A LA
Sbjct: 211 IAALEYN-QWFTKLSSKDLK-LSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLAS 268
Query: 436 ALRHN 450
AL HN
Sbjct: 269 ALAHN 273
>AL024509-3|CAI21665.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
IA ++ N Q T L+ ++K +S + E++ + ++ +E L L N GL A LA
Sbjct: 211 IAALEYN-QWFTKLSSKDLK-LSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLAS 268
Query: 436 ALRHN 450
AL HN
Sbjct: 269 ALAHN 273
>AL022170-1|CAI21583.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
IA ++ N Q T L+ ++K +S + E++ + ++ +E L L N GL A LA
Sbjct: 211 IAALEYN-QWFTKLSSKDLK-LSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLAS 268
Query: 436 ALRHN 450
AL HN
Sbjct: 269 ALAHN 273
>AK125696-1|BAC86250.1| 499|Homo sapiens protein ( Homo sapiens
cDNA FLJ43708 fis, clone TESOP2001953. ).
Length = 499
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 256 IARVQQNDQKLTDLNWNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALAD 435
IA ++ N Q T L+ ++K +S + E++ + ++ +E L L N GL A LA
Sbjct: 211 IAALEYN-QWFTKLSSKDLK-LSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLAS 268
Query: 436 ALRHN 450
AL HN
Sbjct: 269 ALAHN 273
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 701 SLEMRRDPVPRVA--VLEVQPE--TQQGRILFDELSYLHLD 591
SL +R +PVPR +L QPE +Q R+L ELS HLD
Sbjct: 68 SLRLRWEPVPREQGFLLHWQPEGGQEQSRVLGPELSSYHLD 108
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 701 SLEMRRDPVPRVA--VLEVQPE--TQQGRILFDELSYLHLD 591
SL +R +PVPR +L QPE +Q R+L ELS HLD
Sbjct: 882 SLRLRWEPVPREQGFLLHWQPEGGQEQSRVLGPELSSYHLD 922
>D13694-1|BAA02853.1| 1080|Homo sapiens type VII collagen protein.
Length = 1080
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 701 SLEMRRDPVPRVA--VLEVQPE--TQQGRILFDELSYLHLD 591
SL +R +PVPR +L QPE +Q R+L ELS HLD
Sbjct: 687 SLRLRWEPVPREQGFLLHWQPEGGQEQSRVLGPELSSYHLD 727
>AL365443-4|CAH71447.1| 474|Homo sapiens PRAME family member 13
protein.
Length = 474
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 334 FEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVET 480
+ +L L SH L+ G + GAL D LRH + L LS+ET
Sbjct: 363 YSQLSAILPGLSHCSQLTTFYFGRNCMSMGALKDLLRHTSGLSKLSLET 411
>AJ303140-1|CAC42117.1| 1013|Homo sapiens LRR-containing protein
protein.
Length = 1013
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVET 480
W N + DE + L EAL + + LSLV + A ALA L N L L +E
Sbjct: 880 WGN--RVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEE 937
Query: 481 NFI 489
N +
Sbjct: 938 NHL 940
>AF178930-1|AAG33677.1| 1040|Homo sapiens NOD2 protein protein.
Length = 1040
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTALRVLSVET 480
W N + DE + L EAL + + LSLV + A ALA L N L L +E
Sbjct: 907 WGN--RVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEE 964
Query: 481 NFI 489
N +
Sbjct: 965 NHL 967
>AY154460-1|AAO18156.1| 1200|Homo sapiens NALP5 protein.
Length = 1200
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTA-LRVLSVE 477
W K + +E++E L ++ H+ L L + LT+R L LRH T ++ L
Sbjct: 759 WMRDKTLIEEQWEDFCSMLGTHPHLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLMFR 818
Query: 478 TNFISP 495
I+P
Sbjct: 819 NAQITP 824
>AY054986-1|AAL15549.1| 1200|Homo sapiens
maternal-antigen-that-embryos-require protein protein.
Length = 1200
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 301 WNNIKNISDEKFEKLFEALKSNSHVEVLSLVNVGLTDRTAGALADALRHNTA-LRVLSVE 477
W K + +E++E L ++ H+ L L + LT+R L LRH T ++ L
Sbjct: 759 WMRDKTLIEEQWEDFCSMLGTHPHLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLMFR 818
Query: 478 TNFISP 495
I+P
Sbjct: 819 NAQITP 824
>BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 599 GDNSARRTESDPAASRAAPRVQRREAQGRVASPTKHR 709
GD S+ + SDP ++ +P RR A SP+ H+
Sbjct: 331 GDESSANSSSDPESNPTSPMAGRRHAATNKLSPSGHQ 367
>BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 599 GDNSARRTESDPAASRAAPRVQRREAQGRVASPTKHR 709
GD S+ + SDP ++ +P RR A SP+ H+
Sbjct: 331 GDESSANSSSDPESNPTSPMAGRRHAATNKLSPSGHQ 367
>BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 599 GDNSARRTESDPAASRAAPRVQRREAQGRVASPTKHR 709
GD S+ + SDP ++ +P RR A SP+ H+
Sbjct: 331 GDESSANSSSDPESNPTSPMAGRRHAATNKLSPSGHQ 367
>AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ11196 fis, clone PLACE1007688, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 491
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 599 GDNSARRTESDPAASRAAPRVQRREAQGRVASPTKHR 709
GD S+ + SDP ++ +P RR A SP+ H+
Sbjct: 331 GDESSANSSSDPESNPTSPMAGRRHAATNKLSPSGHQ 367
>AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 599 GDNSARRTESDPAASRAAPRVQRREAQGRVASPTKHR 709
GD S+ + SDP ++ +P RR A SP+ H+
Sbjct: 331 GDESSANSSSDPESNPTSPMAGRRHAATNKLSPSGHQ 367
>AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 599 GDNSARRTESDPAASRAAPRVQRREAQGRVASPTKHR 709
GD S+ + SDP ++ +P RR A SP+ H+
Sbjct: 331 GDESSANSSSDPESNPTSPMAGRRHAATNKLSPSGHQ 367
>AL592424-10|CAI16384.1| 142|Homo sapiens tropomodulin 4 (muscle)
protein.
Length = 142
Score = 29.9 bits (64), Expect = 9.8
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -3
Query: 190 DAVP--SESDGLALVQKRRVILV--LIHHRDEYEQALGTASQEEIIDLAAILGFHSMM 29
D VP E G +Q +R I I E E+AL A+ E+ D+AAIL +++M
Sbjct: 84 DLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLM 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,824,842
Number of Sequences: 237096
Number of extensions: 1686742
Number of successful extensions: 5825
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 5465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5814
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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