Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0151
         (717 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5G1T5 Cluster: Organic solvent tolerance protein precu...    34   4.0  
UniRef50_UPI0000499BB9 Cluster: protein phosphatase; n=1; Entamo...    33   5.3  
UniRef50_Q1F0V8 Cluster: Sigma-54 factor, interaction region:Hel...    33   5.3  
UniRef50_Q4Z1C7 Cluster: Putative uncharacterized protein; n=5; ...    33   9.3  
UniRef50_A4HGJ0 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  

>UniRef50_A5G1T5 Cluster: Organic solvent tolerance protein
           precursor; n=1; Acidiphilium cryptum JF-5|Rep: Organic
           solvent tolerance protein precursor - Acidiphilium
           cryptum (strain JF-5)
          Length = 746

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 551 QVLRPSGEFETIKVAGLGQSTTVDNLNDIVYLATDNGVYKYQDDGSIQLYAGFRR 715
           QV+ P  +     V GLGQ+ T+ N + + +  +D  ++  Q  G I  +AG  R
Sbjct: 491 QVIEPRVQLVAAPVYGLGQTRTIPNEDSLDFQFSDANLFSLQRFGGIDRFAGGAR 545


>UniRef50_UPI0000499BB9 Cluster: protein phosphatase; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: protein phosphatase -
           Entamoeba histolytica HM-1:IMSS
          Length = 473

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 15/66 (22%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +3

Query: 327 CLTSITDSSPVMTRESLIKQINTQHFCANIL-KINNFYYSLAERKNLSGIPADISIHWKT 503
           CL  I ++S ++ + +++++INTQ     I+  I+  ++ L     ++G+P++ +++   
Sbjct: 182 CLRIIEEASEILKKRNVLEEINTQGKRMTIVGDIHGQFFDLIHLFEINGLPSEDNVYLFN 241

Query: 504 GKYFSR 521
           G +  R
Sbjct: 242 GDFVDR 247


>UniRef50_Q1F0V8 Cluster: Sigma-54 factor, interaction
           region:Helix-turn-helix, Fis-type; n=1; Clostridium
           oremlandii OhILAs|Rep: Sigma-54 factor, interaction
           region:Helix-turn-helix, Fis-type - Clostridium
           oremlandii OhILAs
          Length = 494

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +2

Query: 338 YNGFKPGYDEGEFDKANKHTTFLREYTQ----DQQFLLFAGGEKEFKRHPGRH*HPLE 499
           + G K G  EG F+ ANK + FL E  Q     Q  LL A  EKE +R  G+   P++
Sbjct: 257 FTGAKKGGKEGRFEMANKGSLFLDEINQLPLFSQPKLLRALQEKEIERVGGKGSIPVD 314


>UniRef50_Q4Z1C7 Cluster: Putative uncharacterized protein; n=5;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium berghei
          Length = 1101

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = +2

Query: 62   LRSI*INKLFKNKVCNLFLVRRQLMRYQIDLQIRNFIEGYSCYL--EINSTFVIA*A*L* 235
            L++I +  LFK K C++ +    L+R + + +I N I+ Y  Y+  ++ +        + 
Sbjct: 738  LKNIYLILLFKRKACDIIIDFCSLLRIKNNNEIIN-IDYYLAYILSKLLTHNKCTYMHIY 796

Query: 236  IIPYLVY*IMITFHLITFLDGWMDFVNIFCMPYVY 340
               YL+Y + I  H+  FL    +F++IF   Y+Y
Sbjct: 797  ASYYLIYLMPINIHIKFFLSYTPNFLSIFFRKYLY 831


>UniRef50_A4HGJ0 Cluster: Putative uncharacterized protein; n=1;
           Leishmania braziliensis|Rep: Putative uncharacterized
           protein - Leishmania braziliensis
          Length = 378

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
 Frame = +2

Query: 404 LREYTQDQQFLLFAGGEKEFKRHPGRH*HPL----EDG*IFFTKISEEMKMSLQVLRPSG 571
           + EYT +  F LF   + +F    GRH   +    E+   +F K S E + S++   P G
Sbjct: 25  ITEYTMETLFQLFLHYDVQFIFATGRHYLSVHKAREELSTYFAKRSSEYRRSVK-SHPCG 83

Query: 572 EFETIKVAGLGQSTTVDNLNDIVYLATDNGVYKYQDDGSI 691
           E +     G G+    D+    ++L T NG   +   G +
Sbjct: 84  EGDN---RGTGKYVAADSTQPSLFLVTSNGARIHDTKGKL 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,721,691
Number of Sequences: 1657284
Number of extensions: 11253569
Number of successful extensions: 27359
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27357
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)