Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0151
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.4  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   1.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.3  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 274 KCNHYLIYEVRYNL 233
           KCNH L+Y++  N+
Sbjct: 474 KCNHGLVYDLELNI 487


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 235 NYTVPRILNNDYISFNHIFRWMD-GLC 312
           N  V +ILNND +  N+I   MD G C
Sbjct: 29  NVDVDKILNNDRVLTNYIKCLMDEGPC 55


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 348 SSPVMTRESLIKQINTQHFCANILKINNFYYSLAERKNLSGI 473
           S+P+M    ++    +  F  N+L I N  Y+  E   + G+
Sbjct: 261 SNPIMWDRVMLLTFWSAFFIVNVLYICNQCYNTVEESRIFGL 302


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 263 MITFHLITFLDGWMDFVNIFCMPYVYN 343
           M TF  ITF+     F NIF +   YN
Sbjct: 399 MSTFSDITFMRTVWKFFNIFLITPFYN 425



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -2

Query: 146 FDTSLTVCELKINYIPYF*TIYLFILTSNCSQYTELNTASLAQCVESR 3
           F T L  C + + Y     ++   ++ S  S+Y +LN      C +S+
Sbjct: 168 FKTFLNSCLMDVYYEFLLISLINILIRSFKSRYKDLNQKLETACEQSK 215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,004
Number of Sequences: 336
Number of extensions: 3233
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)