Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0151
         (717 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0063 - 3749675-3749734,3750264-3750309,3750851-3751422,375...    29   2.8  
02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331...    29   3.7  
09_02_0147 - 4968360-4969151,4969959-4970369,4970856-4970921,497...    29   4.9  

>09_02_0063 -
           3749675-3749734,3750264-3750309,3750851-3751422,
           3751531-3751686
          Length = 277

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 335 VYNGFKPGYDEGEFDKANKH 394
           VYN FKPG+D G F    +H
Sbjct: 180 VYNKFKPGFDSGAFVPIGQH 199


>02_02_0661 -
           12731005-12731238,12732756-12732884,12732969-12733193,
           12733302-12733478,12733576-12733788
          Length = 325

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +2

Query: 611 TTVDNLNDIVYLATDNGVYK 670
           T+V+ +N++VY A +NGVYK
Sbjct: 174 TSVNEINELVYDAINNGVYK 193


>09_02_0147 -
           4968360-4969151,4969959-4970369,4970856-4970921,
           4972164-4972233,4972311-4972369
          Length = 465

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 420 KINNFYYSLAERKNLSGIPADISIHWKTGKY 512
           K + FY   A R  LS +PAD+ IH    KY
Sbjct: 9   KPDTFYTEEAVRSVLSDVPADLIIHVNNTKY 39


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,546,550
Number of Sequences: 37544
Number of extensions: 277335
Number of successful extensions: 527
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)