Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0150
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42439-3|AAA83507.1|  310|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z48334-8|CAE17779.1|  176|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>U42439-3|AAA83507.1|  310|Caenorhabditis elegans Hypothetical
           protein F19C7.3 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = -1

Query: 318 INNHYFYKH*NNEPSIMKR---YENREHIGLFYI*VCSNFF*RSTNNLLAHYYIYKIRFE 148
           I+NH+ Y   N  PS+++R   +E +      Y  +C         ++ +H   Y + F 
Sbjct: 13  IDNHHEYNIKNPWPSLVQRILLFETKSDFLFVYRQMCMR------KDITSHLAKYTVDFW 66

Query: 147 INWHYNRILYKNTY 106
           I W YN     N +
Sbjct: 67  IEWFYNTTKLDNIH 80


>Z48334-8|CAE17779.1|  176|Caenorhabditis elegans Hypothetical
           protein F10B5.9 protein.
          Length = 176

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -2

Query: 533 TLILKMLYLFVSLLYHY 483
           T+I+ +LY FVS+ YHY
Sbjct: 79  TVIISILYTFVSIGYHY 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,424,510
Number of Sequences: 27780
Number of extensions: 200615
Number of successful extensions: 489
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)